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Aliases for TRG-AS1 Gene

Subcategory (RNA class) for TRG-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRG-AS1 Gene

  • T Cell Receptor Gamma Locus Antisense RNA 1 2 3
  • TRG Antisense RNA 1 2 3
  • TCRGV 3

External Ids for TRG-AS1 Gene

Previous GeneCards Identifiers for TRG-AS1 Gene

  • GC07P038384

Summaries for TRG-AS1 Gene

GeneCards Summary for TRG-AS1 Gene

TRG-AS1 (T Cell Receptor Gamma Locus Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRG-AS1 Gene

Genomics for TRG-AS1 Gene

Genomic Location for TRG-AS1 Gene

Chromosome:
7
Start:
38,341,577 bp from pter
End:
38,378,804 bp from pter
Size:
37,228 bases
Orientation:
Plus strand

Genomic View for TRG-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRG-AS1 Gene

No data available for Regulatory Elements for TRG-AS1 Gene

Proteins for TRG-AS1 Gene

Post-translational modifications for TRG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRG-AS1 Gene

Domains & Families for TRG-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRG-AS1 Gene

Function for TRG-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRG-AS1 Gene

Localization for TRG-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRG-AS1 Gene

Pathways & Interactions for TRG-AS1 Gene

SuperPathways for TRG-AS1 Gene

No Data Available

Interacting Proteins for TRG-AS1 Gene

Gene Ontology (GO) - Biological Process for TRG-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRG-AS1 Gene

Drugs & Compounds for TRG-AS1 Gene

No Compound Related Data Available

Transcripts for TRG-AS1 Gene

mRNA/cDNA for TRG-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRG-AS1 Gene

No ASD Table

Relevant External Links for TRG-AS1 Gene

GeneLoc Exon Structure for
TRG-AS1
ECgene alternative splicing isoforms for
TRG-AS1

Expression for TRG-AS1 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRG-AS1 Gene

Orthologs for TRG-AS1 Gene

Evolution for TRG-AS1 Gene

ENSEMBL:
Gene Tree for TRG-AS1 (if available)
TreeFam:
Gene Tree for TRG-AS1 (if available)

No data available for Orthologs for TRG-AS1 Gene

Paralogs for TRG-AS1 Gene

No data available for Paralogs for TRG-AS1 Gene

Variants for TRG-AS1 Gene

Sequence variations from dbSNP and Humsavar for TRG-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs733905 -- 38,340,845(+) GCAGA(C/T)GTCAT upstream-variant-2KB
rs909157 -- 38,340,846(-) TATGA(A/C/T)GTCTG upstream-variant-2KB
rs909158 -- 38,340,629(-) AGAGA(A/G)AGCCG upstream-variant-2KB
rs1006867 -- 38,370,653(+) TACTG(G/T)GAATT intron-variant
rs1808312 -- 38,351,388(+) GTTCT(C/G)TTTTG intron-variant

Relevant External Links for TRG-AS1 Gene

HapMap Linkage Disequilibrium report
TRG-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRG-AS1 Gene

Disorders for TRG-AS1 Gene

Relevant External Links for TRG-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRG-AS1
genes like me logo Genes that share disorders with TRG-AS1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRG-AS1 Gene

Publications for TRG-AS1 Gene

  1. Repertoire of the human T cell gamma genes: high frequency of nonfunctional transcripts in thymus and mature T cells. (PMID: 2949984) Yoshikai Y. … Mak T.W. (Eur. J. Immunol. 1987) 67

Products for TRG-AS1 Gene

Sources for TRG-AS1 Gene

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