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Aliases for TRF-GAA11-1 Gene

Subcategory (RNA class) for TRF-GAA11-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRF-GAA11-1 Gene

  • Transfer RNA-Phe (GAA) 11-1 2 3
  • Transfer RNA Phenylalanine 15 (Anticodon GAA) Pseudogene 2 3
  • TRNA-Phe-GAA-11-1 3
  • TRNAF15P 3

External Ids for TRF-GAA11-1 Gene

Previous HGNC Symbols for TRF-GAA11-1 Gene

  • TRNAF15P

Summaries for TRF-GAA11-1 Gene

GeneCards Summary for TRF-GAA11-1 Gene

TRF-GAA11-1 (Transfer RNA-Phe (GAA) 11-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRF-GAA11-1 Gene

Genomics for TRF-GAA11-1 Gene

Regulatory Elements for TRF-GAA11-1 Gene

Enhancers for TRF-GAA11-1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRF-GAA11-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRF-GAA11-1 Gene

Chromosome:
6
Start:
28,727,078 bp from pter
End:
28,727,150 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRF-GAA11-1 Gene

Genes around TRF-GAA11-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRF-GAA11-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRF-GAA11-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRF-GAA11-1 Gene

Proteins for TRF-GAA11-1 Gene

Post-translational modifications for TRF-GAA11-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRF-GAA11-1 Gene

Domains & Families for TRF-GAA11-1 Gene

Gene Families for TRF-GAA11-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRF-GAA11-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRF-GAA11-1 Gene

Function for TRF-GAA11-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRF-GAA11-1 Gene

Localization for TRF-GAA11-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRF-GAA11-1 Gene

Pathways & Interactions for TRF-GAA11-1 Gene

SuperPathways for TRF-GAA11-1 Gene

No Data Available

Interacting Proteins for TRF-GAA11-1 Gene

Gene Ontology (GO) - Biological Process for TRF-GAA11-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRF-GAA11-1 Gene

Drugs & Compounds for TRF-GAA11-1 Gene

No Compound Related Data Available

Transcripts for TRF-GAA11-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRF-GAA11-1 Gene

No ASD Table

Relevant External Links for TRF-GAA11-1 Gene

GeneLoc Exon Structure for
TRF-GAA11-1
ECgene alternative splicing isoforms for
TRF-GAA11-1

No data available for mRNA/cDNA for TRF-GAA11-1 Gene

Expression for TRF-GAA11-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRF-GAA11-1 Gene

Orthologs for TRF-GAA11-1 Gene

No data available for Orthologs and Evolution for TRF-GAA11-1 Gene

Paralogs for TRF-GAA11-1 Gene

No data available for Paralogs for TRF-GAA11-1 Gene

Variants for TRF-GAA11-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRF-GAA11-1 Gene

Disorders for TRF-GAA11-1 Gene

No disorders were found for TRF-GAA11-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRF-GAA11-1 Gene

Publications for TRF-GAA11-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 67

Products for TRF-GAA11-1 Gene

Sources for TRF-GAA11-1 Gene

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