Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRF-GAA1-5 Gene

Subcategory (RNA class) for TRF-GAA1-5 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TRF-GAA1-5 Gene

  • Transfer RNA-Phe (GAA) 1-5 2 3
  • Transfer RNA Phenylalanine 6 (Anticodon GAA) 2 3
  • Transfer RNA-Phe (GAA) 1-3 2 3
  • TRNA-Phe-GAA-1-3 3
  • TRF-GAA1-3 3
  • TRNAF6 3

External Ids for TRF-GAA1-5 Gene

Previous HGNC Symbols for TRF-GAA1-5 Gene

  • TRNAF6
  • TRF-GAA1-3

Previous GeneCards Identifiers for TRF-GAA1-5 Gene

  • GC06M028792
  • GC06M028793

Summaries for TRF-GAA1-5 Gene

GeneCards Summary for TRF-GAA1-5 Gene

TRF-GAA1-5 (Transfer RNA-Phe (GAA) 1-5) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRF-GAA1-5 Gene

Genomics for TRF-GAA1-5 Gene

Regulatory Elements for TRF-GAA1-5 Gene

Enhancers for TRF-GAA1-5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G094548 1.4 Ensembl ENCODE 0.7 +0.3 267 2.5 HDGF PKNOX1 CREB3L1 ARNT ZFP64 ARID4B FEZF1 DMAP1 ZNF2 YY1 DCT TRF-GAA1-5 GC13M094348
GH13G094545 0.6 ENCODE 0.7 +3.5 3486 1.1 BCOR ZNF146 ZNF280D SCRT2 TEAD4 ZNF580 MAFK DCT TRF-GAA1-5 GC13M094348
GH13G094480 0.8 Ensembl ENCODE 0.2 +68.9 68891 1.2 POLR2A SMARCA4 MAX CEBPG MYC TRF-GAA1-5 GC13M094348
GH13G094482 0.6 ENCODE 0.2 +67.6 67561 0.2 FOSL1 TFE3 JUND BHLHE40 USF2 ZNF354B MGA TRF-GAA1-5 GC13M094348
GH13G094481 0.6 ENCODE 0.2 +67.9 67869 0.4 FOSL1 TFE3 JUND BHLHE40 USF2 ZNF354B MGA TRF-GAA1-5 GC13M094348
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRF-GAA1-5 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRF-GAA1-5 Gene

94,549,650 bp from pter
94,549,722 bp from pter
73 bases
Minus strand

Genomic View for TRF-GAA1-5 Gene

Genes around TRF-GAA1-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRF-GAA1-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRF-GAA1-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRF-GAA1-5 Gene

Proteins for TRF-GAA1-5 Gene

Post-translational modifications for TRF-GAA1-5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRF-GAA1-5 Gene

Domains & Families for TRF-GAA1-5 Gene

Gene Families for TRF-GAA1-5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRF-GAA1-5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRF-GAA1-5 Gene

Function for TRF-GAA1-5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRF-GAA1-5 Gene

Localization for TRF-GAA1-5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRF-GAA1-5 Gene

Pathways & Interactions for TRF-GAA1-5 Gene

SuperPathways for TRF-GAA1-5 Gene

No Data Available

Interacting Proteins for TRF-GAA1-5 Gene

Gene Ontology (GO) - Biological Process for TRF-GAA1-5 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRF-GAA1-5 Gene

Drugs & Compounds for TRF-GAA1-5 Gene

No Compound Related Data Available

Transcripts for TRF-GAA1-5 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRF-GAA1-5 Gene

No ASD Table

Relevant External Links for TRF-GAA1-5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRF-GAA1-5 Gene

Expression for TRF-GAA1-5 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRF-GAA1-5 Gene

Orthologs for TRF-GAA1-5 Gene

No data available for Orthologs and Evolution for TRF-GAA1-5 Gene

Paralogs for TRF-GAA1-5 Gene

No data available for Paralogs for TRF-GAA1-5 Gene

Variants for TRF-GAA1-5 Gene

Relevant External Links for TRF-GAA1-5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRF-GAA1-5 Gene

Disorders for TRF-GAA1-5 Gene

No disorders were found for TRF-GAA1-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRF-GAA1-5 Gene

Publications for TRF-GAA1-5 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRF-GAA1-5 Gene

Sources for TRF-GAA1-5 Gene

Loading form....