Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TREML5P Gene

Aliases for TREML5P Gene

  • Triggering Receptor Expressed On Myeloid Cells Like 5, Pseudogene 2 3 5
  • Triggering Receptor Expressed On Myeloid Cells-Like 2 Pseudogene 1 2 3
  • TREM Like Transcript 5 2 3
  • Triggering Receptor Expressed On Myeloid Cells-Like 5, Pseudogene 2
  • Triggering Receptor Expressed On Myeloid Cells-Like 2 Pseudogene 2
  • TREML2P1 3
  • TREML2P 3
  • TLT5 3

External Ids for TREML5P Gene

Previous HGNC Symbols for TREML5P Gene

  • TREML2P
  • TREML2P1

Previous GeneCards Identifiers for TREML5P Gene

  • GC06P041216

Summaries for TREML5P Gene

GeneCards Summary for TREML5P Gene

TREML5P (Triggering Receptor Expressed On Myeloid Cells Like 5, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TREML5P Gene

Genomics for TREML5P Gene

Regulatory Elements for TREML5P Gene

Enhancers for TREML5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F041198 1.2 Ensembl ENCODE 8.2 -46.0 -45996 6.3 HDGF ATF1 WRNIP1 SIN3A ZNF766 GATA2 ELK1 ZNF263 NCOA1 MIER2 TREML4 TREML3P TREM2 ADCY10P1 TREML5P TREML1 ENSG00000218809 TREML2
GH06F040950 0.5 Ensembl ENCODE 5.9 -296.2 -296231 2.3 CTCF SMARCA4 POLR2A PRDM1 TREML5P GC06P040912 LOC101929555
GH06F041255 0.2 Ensembl 5.1 +8.7 8733 0.6 ZFHX2 EGR2 TREM1 TREML3P ADCY10P1 TREML5P ENSG00000278745 ENSG00000218809
GH06F041242 0.3 FANTOM5 0.8 -4.8 -4773 0.1 TREM1 NFYA TFEB TREML2 TREML5P RNA5SP207
GH06F041247 0.3 FANTOM5 0.8 -0.1 -90 0.3 ELF3 TFAP4 CBX3 SAP130 JUN TAL1 RARA FOSL1 FOS NFE2 TREM1 NFYA TFEB TREML2 TREML5P RNA5SP207
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TREML5P on UCSC Golden Path with GeneCards custom track

Genomic Location for TREML5P Gene

Chromosome:
6
Start:
41,247,369 bp from pter
End:
41,249,649 bp from pter
Size:
2,281 bases
Orientation:
Plus strand

Genomic View for TREML5P Gene

Genes around TREML5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TREML5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TREML5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TREML5P Gene

Proteins for TREML5P Gene

Post-translational modifications for TREML5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for TREML5P Gene

Domains & Families for TREML5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TREML5P Gene

Function for TREML5P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TREML5P Gene

Localization for TREML5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TREML5P Gene

Pathways & Interactions for TREML5P Gene

SuperPathways for TREML5P Gene

No Data Available

Interacting Proteins for TREML5P Gene

Gene Ontology (GO) - Biological Process for TREML5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TREML5P Gene

Transcripts for TREML5P Gene

mRNA/cDNA for TREML5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TREML5P Gene

No ASD Table

Relevant External Links for TREML5P Gene

GeneLoc Exon Structure for
TREML5P
ECgene alternative splicing isoforms for
TREML5P

Expression for TREML5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TREML5P Gene

mRNA differential expression in normal tissues according to GTEx for TREML5P Gene

This gene is overexpressed in Whole Blood (x49.3).

NURSA nuclear receptor signaling pathways regulating expression of TREML5P Gene:

TREML5P

SOURCE GeneReport for Unigene cluster for TREML5P Gene:

Hs.639392
genes like me logo Genes that share expression patterns with TREML5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TREML5P Gene

Orthologs for TREML5P Gene

Evolution for TREML5P Gene

ENSEMBL:
Gene Tree for TREML5P (if available)
TreeFam:
Gene Tree for TREML5P (if available)

No data available for Orthologs for TREML5P Gene

Paralogs for TREML5P Gene

No data available for Paralogs for TREML5P Gene

Variants for TREML5P Gene

Sequence variations from dbSNP and Humsavar for TREML5P Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs111991568 -- 41,247,774(+) GACTT(C/T)GTAGC upstream-variant-2KB
rs112367754 -- 41,249,459(+) AAGAA(-/GAA)GTGTG nc-transcript-variant
rs112927431 -- 41,249,224(+) GTTCC(A/G)TGACA upstream-variant-2KB
rs114949818 -- 41,249,678(+) GGGAC(A/G)GGTGG downstream-variant-500B
rs115212247 -- 41,248,891(+) TTCAG(A/C)ACTTA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TREML5P Gene

Variant ID Type Subtype PubMed ID
nsv602970 CNV gain 21841781

Relevant External Links for TREML5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TREML5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TREML5P Gene

Disorders for TREML5P Gene

Relevant External Links for TREML5P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TREML5P

No disorders were found for TREML5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TREML5P Gene

Publications for TREML5P Gene

  1. The human TREM gene cluster at 6p21.1 encodes both activating and inhibitory single IgV domain receptors and includes NKp44. (PMID: 12645956) Allcock R.J.N. … Trowsdale J. (Eur. J. Immunol. 2003) 2 3 64

Products for TREML5P Gene

Sources for TREML5P Gene

Content
Loading form....