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Aliases for TRE-TTC3-1 Gene

Subcategory (RNA class) for TRE-TTC3-1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRE-TTC3-1 Gene

  • Transfer RNA-Glu (TTC) 3-1 2 3
  • Transfer RNA Glutamic Acid 1 (Anticodon UUC) 2 3
  • Transfer RNA Glutamic Acid (Anticodon UUC) 3
  • TRNA Glutamic Acid (Anticodon UUC) 3
  • TRNA Glutamic Acid 2
  • TRNA-Glu-TTC-3-1 3
  • RP11-108M9.3 5
  • TRNAE1 3
  • TRNE 3
  • TRE 3

External Ids for TRE-TTC3-1 Gene

Previous HGNC Symbols for TRE-TTC3-1 Gene

  • TRE
  • TRNAE1

Previous GeneCards Identifiers for TRE-TTC3-1 Gene

  • GC01P016874
  • GC01P016878

Summaries for TRE-TTC3-1 Gene

GeneCards Summary for TRE-TTC3-1 Gene

TRE-TTC3-1 (Transfer RNA-Glu (TTC) 3-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRE-TTC3-1 Gene

Genomics for TRE-TTC3-1 Gene

Genomic Location for TRE-TTC3-1 Gene

Chromosome:
1
Start:
16,870,945 bp from pter
End:
16,874,092 bp from pter
Size:
3,148 bases
Orientation:
Plus strand

Genomic View for TRE-TTC3-1 Gene

Genes around TRE-TTC3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRE-TTC3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRE-TTC3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRE-TTC3-1 Gene

No data available for Regulatory Elements for TRE-TTC3-1 Gene

Proteins for TRE-TTC3-1 Gene

Post-translational modifications for TRE-TTC3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRE-TTC3-1 Gene

Domains & Families for TRE-TTC3-1 Gene

Gene Families for TRE-TTC3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRE-TTC3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRE-TTC3-1 Gene

Function for TRE-TTC3-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRE-TTC3-1 Gene

Localization for TRE-TTC3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRE-TTC3-1 Gene

Pathways & Interactions for TRE-TTC3-1 Gene

SuperPathways for TRE-TTC3-1 Gene

No Data Available

Interacting Proteins for TRE-TTC3-1 Gene

Gene Ontology (GO) - Biological Process for TRE-TTC3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRE-TTC3-1 Gene

Drugs & Compounds for TRE-TTC3-1 Gene

No Compound Related Data Available

Transcripts for TRE-TTC3-1 Gene

mRNA/cDNA for TRE-TTC3-1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRE-TTC3-1 Gene

No ASD Table

Relevant External Links for TRE-TTC3-1 Gene

GeneLoc Exon Structure for
TRE-TTC3-1
ECgene alternative splicing isoforms for
TRE-TTC3-1

Expression for TRE-TTC3-1 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRE-TTC3-1 Gene

Orthologs for TRE-TTC3-1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRE-TTC3-1 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia U1 36
  • 55 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia U1 36
  • 58 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25012 36
  • 51 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U1 36
  • 32 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia U1 36
  • 100 (a)
OneToOne
chicken
(Gallus gallus)
Aves U1 36
  • 58 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U1 36
  • 52 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii U1 36
  • 44 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 41 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 47 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 46 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 43 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 38 (a)
ManyToMany
U1 36
  • 39 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 38 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 47 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 43 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 47 (a)
ManyToMany
U1 36
  • 46 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 41 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 43 (a)
ManyToMany
U1 36
  • 39 (a)
ManyToMany
U1 36
  • 37 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 43 (a)
ManyToMany
U1 36
  • 43 (a)
ManyToMany
U1 36
  • 45 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 44 (a)
ManyToMany
U1 36
  • 38 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea U1 36
  • 38 (a)
OneToMany
Species with no ortholog for TRE-TTC3-1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for TRE-TTC3-1 Gene

ENSEMBL:
Gene Tree for TRE-TTC3-1 (if available)
TreeFam:
Gene Tree for TRE-TTC3-1 (if available)

Paralogs for TRE-TTC3-1 Gene

No data available for Paralogs for TRE-TTC3-1 Gene

Variants for TRE-TTC3-1 Gene

Relevant External Links for TRE-TTC3-1 Gene

HapMap Linkage Disequilibrium report
TRE-TTC3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRE-TTC3-1 Gene

Disorders for TRE-TTC3-1 Gene

Relevant External Links for TRE-TTC3-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRE-TTC3-1

No disorders were found for TRE-TTC3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRE-TTC3-1 Gene

Publications for TRE-TTC3-1 Gene

  1. A human tRNAGlu gene of high transcriptional activity. (PMID: 6134271) Goddard J.P. … Smith J.D. (Nucleic Acids Res. 1983) 2 3 67
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3
  3. Chromosomal assignment of a glutamic acid transfer RNA (tRNAGlu) gene to 1p36. (PMID: 2912885) Boyd E. … Connor J.M. (Hum. Genet. 1989) 3

Products for TRE-TTC3-1 Gene

Sources for TRE-TTC3-1 Gene

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