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Aliases for TRE-TTC2-1 Gene

Subcategory (RNA class) for TRE-TTC2-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRE-TTC2-1 Gene

  • Transfer RNA-Glu (TTC) 2-1 2 3
  • Transfer RNA Glutamic Acid 7 (Anticodon UUC) 2 3
  • TRNA-Glu-TTC-2-1 3
  • TRNAE7 3

External Ids for TRE-TTC2-1 Gene

ORGUL Members for TRE-TTC2-1 Gene

Previous HGNC Symbols for TRE-TTC2-1 Gene

  • TRNAE7

Summaries for TRE-TTC2-1 Gene

GeneCards Summary for TRE-TTC2-1 Gene

TRE-TTC2-1 (Transfer RNA-Glu (TTC) 2-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRE-TTC2-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRE-TTC2-1 Gene

Genomics for TRE-TTC2-1 Gene

Regulatory Elements for TRE-TTC2-1 Gene

Enhancers for TRE-TTC2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H044917 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -0.4 -403 2 FOXA2 ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 SLC30A9 ZNF766 CBX5 RCN1P2 GPALPP1 RN7SL49P TPT1-AS1 COG3 NUFIP1 TSC22D1 ERICH6B KCTD4 TRE-TTC2-1
GH13H044920 1.3 Ensembl ENCODE dbSUPER 0.7 -3.8 -3762 2 SOX13 PKNOX1 ESRRA FOXA2 SAP130 TEAD3 CTBP1 GATA3 FOSL2 FOS TSC22D1 NUFIP1 TRE-TTC2-1 PIR55542
GH13H044902 1.1 Ensembl ENCODE dbSUPER 0.4 +13.0 13007 5 RFX1 BMI1 RAD21 NR2F2 FOXA1 JUND GATA3 POLR2A FOS TPT1 TPT1-AS1 RN7SL49P LOC105370187 TRE-TTC2-1
GH13H044925 0.4 dbSUPER 0.4 -8.2 -8156 1 ZNF121 NUFIP1 PIR55542 TRE-TTC2-1
GH13H044923 0.2 dbSUPER 0.4 -5.5 -5538 0 PIR55542 TRE-TTC2-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRE-TTC2-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRE-TTC2-1 Gene

Chromosome:
13
Start:
44,917,927 bp from pter
End:
44,917,998 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRE-TTC2-1 Gene

Genes around TRE-TTC2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRE-TTC2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRE-TTC2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRE-TTC2-1 Gene

Proteins for TRE-TTC2-1 Gene

Post-translational modifications for TRE-TTC2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRE-TTC2-1 Gene

Domains & Families for TRE-TTC2-1 Gene

Gene Families for TRE-TTC2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRE-TTC2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRE-TTC2-1 Gene

Function for TRE-TTC2-1 Gene

Phenotypes From GWAS Catalog for TRE-TTC2-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRE-TTC2-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRE-TTC2-1 Gene

Localization for TRE-TTC2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRE-TTC2-1 Gene

Pathways & Interactions for TRE-TTC2-1 Gene

SuperPathways for TRE-TTC2-1 Gene

No Data Available

Interacting Proteins for TRE-TTC2-1 Gene

Gene Ontology (GO) - Biological Process for TRE-TTC2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRE-TTC2-1 Gene

Drugs & Compounds for TRE-TTC2-1 Gene

No Compound Related Data Available

Transcripts for TRE-TTC2-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRE-TTC2-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRE-TTC2-1 Gene

No ASD Table

Relevant External Links for TRE-TTC2-1 Gene

GeneLoc Exon Structure for
TRE-TTC2-1
ECgene alternative splicing isoforms for
TRE-TTC2-1

No data available for mRNA/cDNA for TRE-TTC2-1 Gene

Expression for TRE-TTC2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRE-TTC2-1 Gene

Orthologs for TRE-TTC2-1 Gene

No data available for Orthologs and Evolution for TRE-TTC2-1 Gene

Paralogs for TRE-TTC2-1 Gene

No data available for Paralogs for TRE-TTC2-1 Gene

Variants for TRE-TTC2-1 Gene

Relevant External Links for TRE-TTC2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRE-TTC2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRE-TTC2-1 Gene

Disorders for TRE-TTC2-1 Gene

No disorders were found for TRE-TTC2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRE-TTC2-1 Gene

Publications for TRE-TTC2-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRE-TTC2-1 Gene

Sources for TRE-TTC2-1 Gene

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