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Aliases for TRE-CTC9-1 Gene

Subcategory (RNA class) for TRE-CTC9-1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TRE-CTC9-1 Gene

  • Transfer RNA-Glu (CTC) 9-1 2 3
  • Transfer RNA Glutamic Acid 38 (Anticodon CUC) Pseudogene 2 3
  • TRNA-Glu-CTC-9-1 3
  • TRNAE38P 3

External Ids for TRE-CTC9-1 Gene

Previous HGNC Symbols for TRE-CTC9-1 Gene

  • TRNAE38P

Summaries for TRE-CTC9-1 Gene

GeneCards Summary for TRE-CTC9-1 Gene

TRE-CTC9-1 (Transfer RNA-Glu (CTC) 9-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRE-CTC9-1 Gene

Genomics for TRE-CTC9-1 Gene

Regulatory Elements for TRE-CTC9-1 Gene

Enhancers for TRE-CTC9-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G150370 0.7 ENCODE 0.4 +8.7 8706 1.2 TAF1 MAX CEBPG RAD21 YY1 GATA3 HNF4G TCF7L2 HLF CEBPB TRE-CTC9-1 LOC105373685
GH02G150404 0.8 Ensembl 0.3 +41.5 41538 0.2 GTF2E2 DDX20 ZNF175 BACH1 ZBTB40 YY1 FOSL1 TCF12 ZNF316 ZNF766 LOC105373685 TRE-CTC9-1
GH02G150326 0.8 VISTA 0.3 -35.1 -35104 2.6 NR3C1 EP300 EZH2 EGR2 GC02P150288 TRE-CTC9-1
GH02G150403 0.7 Ensembl 0.3 +40.9 40938 0.6 PKNOX1 HLF MAFG TBX21 EP300 FOSL1 ZNF316 ATF3 PBX2 ZBTB33 LOC105373685 TRE-CTC9-1
GH02G150410 1 Ensembl ENCODE 0.2 +48.4 48360 2.0 JUN TEAD4 MAX RBBP5 CHD7 TEAD3 ZNF316 GATA2 POLR2A ZNF584 LOC105373685 TRE-CTC9-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRE-CTC9-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRE-CTC9-1 Gene

150,362,763 bp from pter
150,362,835 bp from pter
73 bases
Plus strand

Genomic View for TRE-CTC9-1 Gene

Genes around TRE-CTC9-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRE-CTC9-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRE-CTC9-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRE-CTC9-1 Gene

Proteins for TRE-CTC9-1 Gene

Post-translational modifications for TRE-CTC9-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRE-CTC9-1 Gene

Domains & Families for TRE-CTC9-1 Gene

Gene Families for TRE-CTC9-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRE-CTC9-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRE-CTC9-1 Gene

Function for TRE-CTC9-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRE-CTC9-1 Gene

Localization for TRE-CTC9-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRE-CTC9-1 Gene

Pathways & Interactions for TRE-CTC9-1 Gene

SuperPathways for TRE-CTC9-1 Gene

No Data Available

Interacting Proteins for TRE-CTC9-1 Gene

Gene Ontology (GO) - Biological Process for TRE-CTC9-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRE-CTC9-1 Gene

Drugs & Compounds for TRE-CTC9-1 Gene

No Compound Related Data Available

Transcripts for TRE-CTC9-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRE-CTC9-1 Gene

No ASD Table

Relevant External Links for TRE-CTC9-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRE-CTC9-1 Gene

Expression for TRE-CTC9-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRE-CTC9-1 Gene

Orthologs for TRE-CTC9-1 Gene

No data available for Orthologs and Evolution for TRE-CTC9-1 Gene

Paralogs for TRE-CTC9-1 Gene

No data available for Paralogs for TRE-CTC9-1 Gene

Variants for TRE-CTC9-1 Gene

Relevant External Links for TRE-CTC9-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRE-CTC9-1 Gene

Disorders for TRE-CTC9-1 Gene

No disorders were found for TRE-CTC9-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRE-CTC9-1 Gene

Publications for TRE-CTC9-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRE-CTC9-1 Gene

Sources for TRE-CTC9-1 Gene

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