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Aliases for TRE-CTC1-1 Gene

Subcategory (RNA class) for TRE-CTC1-1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TRE-CTC1-1 Gene

  • Transfer RNA-Glu (CTC) 1-1 2 3
  • Transfer RNA Glutamic Acid 21 (Anticodon CUC) 2 3
  • TRNA-Glu-CTC-1-1 3
  • TRNAE21 3

External Ids for TRE-CTC1-1 Gene

Previous HGNC Symbols for TRE-CTC1-1 Gene

  • TRNAE21

Summaries for TRE-CTC1-1 Gene

GeneCards Summary for TRE-CTC1-1 Gene

TRE-CTC1-1 (Transfer RNA-Glu (CTC) 1-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRE-CTC1-1 Gene

Genomics for TRE-CTC1-1 Gene

Regulatory Elements for TRE-CTC1-1 Gene

Enhancers for TRE-CTC1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F146032 0.5 Ensembl ENCODE 0.8 -2.9 -2892 0.4 CTCF ZNF654 SMC3 TRIM22 REST RAD21 TCF7L2 ANKRD35 TXNIP LIX1L-AS1 RBM8A TRE-CTC1-1
GH01F146019 0.9 Ensembl ENCODE 0.4 -14.6 -14643 3.7 PKNOX1 ARID4B YY1 GTF3C2 FOS NCOA1 MIER2 ZNF592 KAT8 PPARGC1A POLR3C ANKRD35 TRE-CTC1-1 TXNIP
GH01F146012 0.9 Ensembl ENCODE 0.3 -22.6 -22591 0.6 HDGF ATF1 PKNOX1 ZNF2 RAD21 RFX5 CHAMP1 KAT2B ELK1 GATA2 POLR3C TXNIP TRE-CTC1-1
GH01F146010 0.4 Ensembl 0.3 -25.2 -25192 0.6 CTBP1 ZNF366 GFI1B ZNF76 PRDM10 KDM1A MNT PRDM1 ZBTB17 PRDM2 NOTCH2NL ANKRD35 TXNIP TRE-CTC1-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRE-CTC1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRE-CTC1-1 Gene

146,035,692 bp from pter
146,035,763 bp from pter
72 bases
Plus strand

Genomic View for TRE-CTC1-1 Gene

Genes around TRE-CTC1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRE-CTC1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRE-CTC1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRE-CTC1-1 Gene

Proteins for TRE-CTC1-1 Gene

Post-translational modifications for TRE-CTC1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRE-CTC1-1 Gene

Domains & Families for TRE-CTC1-1 Gene

Gene Families for TRE-CTC1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRE-CTC1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRE-CTC1-1 Gene

Function for TRE-CTC1-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRE-CTC1-1 Gene

Localization for TRE-CTC1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRE-CTC1-1 Gene

Pathways & Interactions for TRE-CTC1-1 Gene

SuperPathways for TRE-CTC1-1 Gene

No Data Available

Interacting Proteins for TRE-CTC1-1 Gene

Gene Ontology (GO) - Biological Process for TRE-CTC1-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRE-CTC1-1 Gene

Transcripts for TRE-CTC1-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRE-CTC1-1 Gene

No ASD Table

Relevant External Links for TRE-CTC1-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRE-CTC1-1 Gene

Expression for TRE-CTC1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRE-CTC1-1 Gene

Orthologs for TRE-CTC1-1 Gene

No data available for Orthologs and Evolution for TRE-CTC1-1 Gene

Paralogs for TRE-CTC1-1 Gene

No data available for Paralogs for TRE-CTC1-1 Gene

Variants for TRE-CTC1-1 Gene

Relevant External Links for TRE-CTC1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRE-CTC1-1 Gene

Disorders for TRE-CTC1-1 Gene

No disorders were found for TRE-CTC1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRE-CTC1-1 Gene

Publications for TRE-CTC1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRE-CTC1-1 Gene

Sources for TRE-CTC1-1 Gene

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