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Aliases for TRDD1 Gene

Aliases for TRDD1 Gene

  • T Cell Receptor Delta Diversity 1 2 3 5

External Ids for TRDD1 Gene

Previous GeneCards Identifiers for TRDD1 Gene

  • GC14U990275
  • GC14P020897
  • GC14P021979
  • GC14P022909
  • GC14P022913
  • GC14P022439

Summaries for TRDD1 Gene

Entrez Gene Summary for TRDD1 Gene

  • T cell receptors recognize foreign antigens which have been processed as small peptides and bound to major histocompatibility complex (MHC) molecules at the surface of antigen presenting cells (APC). Each T cell receptor is a dimer consisting of one alpha and one beta chain or one delta and one gamma chain. In a single cell, the T cell receptor loci are rearranged and expressed in the order delta, gamma, beta, and alpha. If both delta and gamma rearrangements produce functional chains, the cell expresses delta and gamma. If not, the cell proceeds to rearrange the beta and alpha loci. This region represents the germline organization of the T cell receptor alpha and delta loci. Both the alpha and delta loci include V (variable), J (joining), and C (constant) segments and the delta locus also includes diversity (D) segments. The delta locus is situated within the alpha locus, between the alpha V and J segments. During T cell development, the delta chain is synthesized by a recombination event at the DNA level joining a D segment with a J segment; a V segment is then joined to the D-J gene. The alpha chain is synthesized by recombination joining a single V segment with a J segment. For both chains, the C segment is later joined by splicing at the RNA level. Recombination of many different V segments with several J segments provides a wide range of antigen recognition. Additional diversity is attained by junctional diversity, resulting from the random additional of nucleotides by terminal deoxynucleotidyltransferase. Five variable segments can be used in either alpha or delta chains and are described by TRAV/DV symbols. Several V and J segments of the alpha locus are known to be incapable of encoding a protein and are considered pseudogenes. [provided by RefSeq, Aug 2016]

GeneCards Summary for TRDD1 Gene

TRDD1 (T Cell Receptor Delta Diversity 1) is a Protein Coding gene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRDD1 Gene

Genomics for TRDD1 Gene

Regulatory Elements for TRDD1 Gene

Enhancers for TRDD1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around TRDD1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRDD1 Gene

Chromosome:
14
Start:
22,438,547 bp from pter
End:
22,438,554 bp from pter
Size:
8 bases
Orientation:
Plus strand

Genomic View for TRDD1 Gene

Genes around TRDD1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRDD1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRDD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRDD1 Gene

Proteins for TRDD1 Gene

Post-translational modifications for TRDD1 Gene

No Post-translational modifications

Other Protein References for TRDD1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRDD1 Gene

Domains & Families for TRDD1 Gene

Gene Families for TRDD1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRDD1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRDD1 Gene

Function for TRDD1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRDD1 Gene

Localization for TRDD1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRDD1 Gene

Pathways & Interactions for TRDD1 Gene

SuperPathways for TRDD1 Gene

No Data Available

Interacting Proteins for TRDD1 Gene

Gene Ontology (GO) - Biological Process for TRDD1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRDD1 Gene

Drugs & Compounds for TRDD1 Gene

No Compound Related Data Available

Transcripts for TRDD1 Gene

mRNA/cDNA for TRDD1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRDD1 Gene

No ASD Table

Relevant External Links for TRDD1 Gene

GeneLoc Exon Structure for
TRDD1
ECgene alternative splicing isoforms for
TRDD1

Expression for TRDD1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TRDD1 Gene:

TRDD1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRDD1 Gene

Orthologs for TRDD1 Gene

Evolution for TRDD1 Gene

ENSEMBL:
Gene Tree for TRDD1 (if available)
TreeFam:
Gene Tree for TRDD1 (if available)

No data available for Orthologs for TRDD1 Gene

Paralogs for TRDD1 Gene

No data available for Paralogs for TRDD1 Gene

Variants for TRDD1 Gene

Relevant External Links for TRDD1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRDD1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRDD1 Gene

Disorders for TRDD1 Gene

No disorders were found for TRDD1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRDD1 Gene

Publications for TRDD1 Gene

  1. Human T-cell-receptor delta chain: genomic organization, diversity, and expression in populations of cells. (PMID: 2974163) Loh E.Y. … Lanier L.L. (Proc. Natl. Acad. Sci. U.S.A. 1988) 2 3 65

Products for TRDD1 Gene

Sources for TRDD1 Gene

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