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Aliases for TRD-GTC2-8 Gene

Subcategory (RNA class) for TRD-GTC2-8 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRD-GTC2-8 Gene

  • Transfer RNA-Asp (GTC) 2-8 2 3
  • Transfer RNA Aspartic Acid 12 (Anticodon GUC) 2 3
  • Transfer RNA-Asp (GTC) 2-6 2 3
  • TRNA-Asp-GTC-2-6 3
  • TRD-GTC2-6 3
  • TRNAD12 3

External Ids for TRD-GTC2-8 Gene

Previous HGNC Symbols for TRD-GTC2-8 Gene

  • TRNAD12
  • TRD-GTC2-6

Previous GeneCards Identifiers for TRD-GTC2-8 Gene

  • GC12M124939

Summaries for TRD-GTC2-8 Gene

GeneCards Summary for TRD-GTC2-8 Gene

TRD-GTC2-8 (Transfer RNA-Asp (GTC) 2-8) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRD-GTC2-8 Gene

Genomics for TRD-GTC2-8 Gene

Regulatory Elements for TRD-GTC2-8 Gene

Enhancers for TRD-GTC2-8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F096033 0.6 ENCODE 0.8 -0.8 -783 2.9 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 NEDD1 ELK3 HAL PGAM1P5 LOC102723340 ENSG00000258272 ENSG00000258313 ENSG00000202368 ENSG00000257470 NTN4
GH12F096036 0.6 ENCODE 0.8 +1.4 1411 1.4 HDAC1 MTA2 TAL1 CEBPB ARID1B IRF9 ZNF121 PBX2 CEBPA ZBTB33 HAL LOC102723340 LTA4H TRD-GTC2-8
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRD-GTC2-8 on UCSC Golden Path with GeneCards custom track

Promoters for TRD-GTC2-8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001466249 -1621 4001 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1

Genomic Location for TRD-GTC2-8 Gene

Chromosome:
12
Start:
96,036,021 bp from pter
End:
96,036,092 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRD-GTC2-8 Gene

Genes around TRD-GTC2-8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRD-GTC2-8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRD-GTC2-8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRD-GTC2-8 Gene

Proteins for TRD-GTC2-8 Gene

Post-translational modifications for TRD-GTC2-8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRD-GTC2-8 Gene

Domains & Families for TRD-GTC2-8 Gene

Gene Families for TRD-GTC2-8 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRD-GTC2-8: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRD-GTC2-8 Gene

Function for TRD-GTC2-8 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRD-GTC2-8 Gene

Localization for TRD-GTC2-8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRD-GTC2-8 Gene

Pathways & Interactions for TRD-GTC2-8 Gene

SuperPathways for TRD-GTC2-8 Gene

No Data Available

Interacting Proteins for TRD-GTC2-8 Gene

Gene Ontology (GO) - Biological Process for TRD-GTC2-8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRD-GTC2-8 Gene

Transcripts for TRD-GTC2-8 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRD-GTC2-8 Gene

No ASD Table

Relevant External Links for TRD-GTC2-8 Gene

GeneLoc Exon Structure for
TRD-GTC2-8
ECgene alternative splicing isoforms for
TRD-GTC2-8

No data available for mRNA/cDNA for TRD-GTC2-8 Gene

Expression for TRD-GTC2-8 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRD-GTC2-8 Gene

Orthologs for TRD-GTC2-8 Gene

No data available for Orthologs and Evolution for TRD-GTC2-8 Gene

Paralogs for TRD-GTC2-8 Gene

No data available for Paralogs for TRD-GTC2-8 Gene

Variants for TRD-GTC2-8 Gene

Relevant External Links for TRD-GTC2-8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRD-GTC2-8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRD-GTC2-8 Gene

Disorders for TRD-GTC2-8 Gene

No disorders were found for TRD-GTC2-8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRD-GTC2-8 Gene

Publications for TRD-GTC2-8 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRD-GTC2-8 Gene

Sources for TRD-GTC2-8 Gene

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