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Aliases for TRD-GTC2-10 Gene

Subcategory (RNA class) for TRD-GTC2-10 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRD-GTC2-10 Gene

  • Transfer RNA-Asp (GTC) 2-10 2 3
  • Transfer RNA Aspartic Acid 16 (Anticodon GUC) 2 3
  • Transfer RNA-Asp (GTC) 2-8 2 3
  • TRNA-Asp-GTC-2-8 3
  • TRD-GTC2-8 3
  • TRNAD16 3

External Ids for TRD-GTC2-10 Gene

Previous HGNC Symbols for TRD-GTC2-10 Gene

  • TRNAD16
  • TRD-GTC2-8

Previous GeneCards Identifiers for TRD-GTC2-10 Gene

  • GC06P027479

Summaries for TRD-GTC2-10 Gene

GeneCards Summary for TRD-GTC2-10 Gene

TRD-GTC2-10 (Transfer RNA-Asp (GTC) 2-10) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRD-GTC2-10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRD-GTC2-10 Gene

Genomics for TRD-GTC2-10 Gene

GeneHancer (GH) Regulatory Elements for TRD-GTC2-10 Gene

Promoters and enhancers for TRD-GTC2-10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I124937 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.2 201 5 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 GC12P124940 TRD-GTC2-10 TRA-TGC4-1 PIR61666 ENSG00000270130 NCOR2 DHX37 ENSG00000269938 ENSG00000270061 ENSG00000269997
GH12I124938 Enhancer 0.8 ENCODE 0.8 +3.4 3408 0.2 PKNOX1 RARA ATF7 SMARCA5 CEBPB ZNF592 NFIL3 SMARCA4 GMEB1 IKZF1 RPL22P19 TRD-GTC2-10
GH12I124936 Enhancer 0.4 ENCODE dbSUPER 0.8 +2.8 2841 0.1 RPL22P19 TRD-GTC2-10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRD-GTC2-10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRD-GTC2-10 Gene

Genomic Locations for TRD-GTC2-10 Gene
chr12:124,939,647-124,939,718
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr12:125,424,193-125,424,264
(GRCh37/hg19)

Genomic View for TRD-GTC2-10 Gene

Genes around TRD-GTC2-10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRD-GTC2-10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRD-GTC2-10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRD-GTC2-10 Gene

Proteins for TRD-GTC2-10 Gene

Post-translational modifications for TRD-GTC2-10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRD-GTC2-10 Gene

Domains & Families for TRD-GTC2-10 Gene

Gene Families for TRD-GTC2-10 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRD-GTC2-10: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRD-GTC2-10 Gene

Function for TRD-GTC2-10 Gene

Phenotypes From GWAS Catalog for TRD-GTC2-10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRD-GTC2-10 Gene

Localization for TRD-GTC2-10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRD-GTC2-10 Gene

Pathways & Interactions for TRD-GTC2-10 Gene

SuperPathways for TRD-GTC2-10 Gene

No Data Available

Interacting Proteins for TRD-GTC2-10 Gene

Gene Ontology (GO) - Biological Process for TRD-GTC2-10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRD-GTC2-10 Gene

Drugs & Compounds for TRD-GTC2-10 Gene

No Compound Related Data Available

Transcripts for TRD-GTC2-10 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRD-GTC2-10 Gene

No ASD Table

Relevant External Links for TRD-GTC2-10 Gene

GeneLoc Exon Structure for
TRD-GTC2-10
ECgene alternative splicing isoforms for
TRD-GTC2-10

No data available for mRNA/cDNA for TRD-GTC2-10 Gene

Expression for TRD-GTC2-10 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRD-GTC2-10 Gene

Orthologs for TRD-GTC2-10 Gene

No data available for Orthologs and Evolution for TRD-GTC2-10 Gene

Paralogs for TRD-GTC2-10 Gene

No data available for Paralogs for TRD-GTC2-10 Gene

Variants for TRD-GTC2-10 Gene

Additional Variant Information for TRD-GTC2-10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRD-GTC2-10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRD-GTC2-10 Gene

Disorders for TRD-GTC2-10 Gene

No disorders were found for TRD-GTC2-10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRD-GTC2-10 Gene

Publications for TRD-GTC2-10 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRD-GTC2-10 Gene

Sources for TRD-GTC2-10 Gene

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