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Aliases for TRC-GCA19-1 Gene

Subcategory (RNA class) for TRC-GCA19-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRC-GCA19-1 Gene

  • Transfer RNA-Cys (GCA) 19-1 2 3
  • Transfer RNA Cysteine 13 (Anticodon GCA) 2 3
  • TRNA-Cys-GCA-19-1 3
  • TRNAC13 3

External Ids for TRC-GCA19-1 Gene

ORGUL Members for TRC-GCA19-1 Gene

Previous HGNC Symbols for TRC-GCA19-1 Gene

  • TRNAC13

Summaries for TRC-GCA19-1 Gene

GeneCards Summary for TRC-GCA19-1 Gene

TRC-GCA19-1 (Transfer RNA-Cys (GCA) 19-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRC-GCA19-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRC-GCA19-1 Gene

Genomics for TRC-GCA19-1 Gene

GeneHancer (GH) Regulatory Elements for TRC-GCA19-1 Gene

Promoters and enhancers for TRC-GCA19-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I149622 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE 0.4 -11.3 -11253 3.8 HDGF CLOCK SMAD1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF767P ZNF398 ZNF212 ZNF282 ZNF746 ENSG00000271664 ZNF783 CUL1 ZNF862 GC07M149614
GH07I149609 Enhancer 0.6 ENCODE 0.8 +2.4 2379 1.8 SMARCE1 CLOCK DPF2 MNT FOXA1 ZNF217 CTBP1 GATA3 RCOR1 FOS ZNF862 GC07M149614 TRC-GCA19-1 TRS-AGA5-1 ZNF767P GC07M149505
GH07I149620 Enhancer 0.9 FANTOM5 ENCODE 0.4 -8.4 -8419 1.6 HDGF PKNOX1 BACH1 EBF1 ZNF316 ATF7 NFE2 MAFK IKZF2 RUNX3 ZNF746 ZNF767P ZNF862 SSPO TRC-GCA19-1 GC07M149614 GC07M149505
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRC-GCA19-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRC-GCA19-1 Gene

Genomic Locations for TRC-GCA19-1 Gene
chr7:149,613,065-149,613,136
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr7:149,310,156-149,310,227
(GRCh37/hg19)

Genomic View for TRC-GCA19-1 Gene

Genes around TRC-GCA19-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRC-GCA19-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRC-GCA19-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRC-GCA19-1 Gene

Proteins for TRC-GCA19-1 Gene

Post-translational modifications for TRC-GCA19-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRC-GCA19-1 Gene

Domains & Families for TRC-GCA19-1 Gene

Gene Families for TRC-GCA19-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRC-GCA19-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRC-GCA19-1 Gene

Function for TRC-GCA19-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRC-GCA19-1 Gene

Localization for TRC-GCA19-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRC-GCA19-1 Gene

Pathways & Interactions for TRC-GCA19-1 Gene

SuperPathways for TRC-GCA19-1 Gene

No Data Available

Interacting Proteins for TRC-GCA19-1 Gene

Gene Ontology (GO) - Biological Process for TRC-GCA19-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRC-GCA19-1 Gene

Drugs & Compounds for TRC-GCA19-1 Gene

No Compound Related Data Available

Transcripts for TRC-GCA19-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRC-GCA19-1 Gene

No ASD Table

Relevant External Links for TRC-GCA19-1 Gene

GeneLoc Exon Structure for
TRC-GCA19-1
ECgene alternative splicing isoforms for
TRC-GCA19-1

No data available for mRNA/cDNA for TRC-GCA19-1 Gene

Expression for TRC-GCA19-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRC-GCA19-1 Gene

Orthologs for TRC-GCA19-1 Gene

No data available for Orthologs and Evolution for TRC-GCA19-1 Gene

Paralogs for TRC-GCA19-1 Gene

No data available for Paralogs for TRC-GCA19-1 Gene

Variants for TRC-GCA19-1 Gene

Additional Variant Information for TRC-GCA19-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRC-GCA19-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRC-GCA19-1 Gene

Disorders for TRC-GCA19-1 Gene

No disorders were found for TRC-GCA19-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRC-GCA19-1 Gene

Publications for TRC-GCA19-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRC-GCA19-1 Gene

Sources for TRC-GCA19-1 Gene

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