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Aliases for TRBV7-1 Gene

Aliases for TRBV7-1 Gene

  • T Cell Receptor Beta Variable 7-1 (Non-Functional) 2 3
  • T Cell Receptor Beta Variable 7-1 Pseudogene 3
  • T Cell Receptor Beta Variable 7-1 2
  • TCRBV6S7P 3
  • TCRBV7S1 3
  • TRBV71 3

External Ids for TRBV7-1 Gene

Summaries for TRBV7-1 Gene

GeneCards Summary for TRBV7-1 Gene

TRBV7-1 (T Cell Receptor Beta Variable 7-1 (Non-Functional)) is a Pseudogene. An important paralog of this gene is TRBV2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV7-1 Gene

Genomics for TRBV7-1 Gene

Genomic Location for TRBV7-1 Gene

Start:
142,332,182 bp from pter
End:
142,332,701 bp from pter
Size:
520 bases
Orientation:
Plus strand

Genomic View for TRBV7-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRBV7-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV7-1 Gene

No data available for Regulatory Elements for TRBV7-1 Gene

Proteins for TRBV7-1 Gene

  • Protein details for TRBV7-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A6YYK4-A0A0A6YYK4
    Recommended name:
    Protein TRBV7-1
    Protein Accession:
    A0A0A6YYK4
    Secondary Accessions:

    Protein attributes for TRBV7-1 Gene

    Size:
    115 amino acids
    Molecular mass:
    12595 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV7-1 Gene

Proteomics data for TRBV7-1 Gene at MOPED

Post-translational modifications for TRBV7-1 Gene

No Post-translational modifications

Other Protein References for TRBV7-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV7-1 Gene

Domains for TRBV7-1 Gene

Gene Families for TRBV7-1 Gene

HGNC:
  • TRB :T cell receptors / TRB locus

Protein Domains for TRBV7-1 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with TRBV7-1: view

No data available for UniProtKB/Swiss-Prot for TRBV7-1 Gene

Function for TRBV7-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRBV7-1 Gene

Localization for TRBV7-1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TRBV7-1 Gene COMPARTMENTS Subcellular localization image for TRBV7-1 gene
Compartment Confidence
extracellular 3

No data available for Gene Ontology (GO) - Cellular Components for TRBV7-1 Gene

Pathways for TRBV7-1 Gene

SuperPathways for TRBV7-1 Gene

No Data Available

Interacting Proteins for TRBV7-1 Gene

Gene Ontology (GO) - Biological Process for TRBV7-1 Gene

None

No data available for Pathways by source for TRBV7-1 Gene

Transcripts for TRBV7-1 Gene

mRNA/cDNA for TRBV7-1 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV7-1 Gene

No ASD Table

Relevant External Links for TRBV7-1 Gene

GeneLoc Exon Structure for
TRBV7-1
ECgene alternative splicing isoforms for
TRBV7-1

Expression for TRBV7-1 Gene

mRNA expression in normal human tissues for TRBV7-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV7-1 Gene

This gene is overexpressed in Testis (41.0) and Pancreas (4.3).
genes like me logo Genes that share expressions with TRBV7-1: view

Orthologs for TRBV7-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV7-1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TRBV7-1 37
  • 82 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 37
  • 59 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 51 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 38 (a)
ManyToMany
-- 37
  • 47 (a)
ManyToMany
-- 37
  • 51 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 37 (a)
OneToMany
Species with no ortholog for TRBV7-1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV7-1 Gene

ENSEMBL:
Gene Tree for TRBV7-1 (if available)
TreeFam:
Gene Tree for TRBV7-1 (if available)

Paralogs for TRBV7-1 Gene

genes like me logo Genes that share paralogs with TRBV7-1: view

Variants for TRBV7-1 Gene

Relevant External Links for TRBV7-1 Gene

HapMap Linkage Disequilibrium report
TRBV7-1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRBV7-1 Gene

Disorders for TRBV7-1 Gene

No disorders were found for TRBV7-1 Gene.

No data available for UniProtKB/Swiss-Prot for TRBV7-1 Gene

Publications for TRBV7-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3
  2. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. (PMID: 1404388) Tomlinson I.M. … Winter G. (J. Mol. Biol. 1992) 3
  3. The genomic structure of human V beta 6 T cell antigen receptor genes. (PMID: 1660526) Li Y. … Posnett D.N. (J. Exp. Med. 1991) 3
  4. Human Tcrb-V6.10 is a pseudogene with Alu repetitive sequences in the promoter region. (PMID: 8381389) Li Y. … Posnett D.N. (Immunogenetics 1993) 3

Products for TRBV7-1 Gene

Sources for TRBV7-1 Gene

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