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Aliases for TRBV7-1 Gene

Aliases for TRBV7-1 Gene

  • T Cell Receptor Beta Variable 7-1 (Non-Functional) 2 3
  • T-Cell Receptor Beta Variable 7-1 (Non-Functional) 5
  • T Cell Receptor Beta Variable 7-1 Pseudogene 3
  • TCRBV6S7P 3
  • TCRBV7S1 3
  • TRBV71 3

External Ids for TRBV7-1 Gene

Previous GeneCards Identifiers for TRBV7-1 Gene

  • GC07U990220
  • GC07P141362
  • GC07P141439
  • GC07P141485
  • GC07P141690
  • GC07P142165
  • GC07P142187
  • GC07P142317
  • GC07P142370
  • GC07P142411
  • GC07P142464
  • GC07P142584
  • GC07P142675
  • GC07P142743
  • GC07P142805
  • GC07P142604
  • GC07P142838
  • GC07P143001
  • GC07P143149
  • GC07P143349
  • GC07P143498
  • GC07P143630

Summaries for TRBV7-1 Gene

GeneCards Summary for TRBV7-1 Gene

TRBV7-1 (T Cell Receptor Beta Variable 7-1 (Non-Functional)) is a Pseudogene. An important paralog of this gene is TRBV7-2.

Additional gene information for TRBV7-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV7-1 Gene

Genomics for TRBV7-1 Gene

GeneHancer (GH) Regulatory Elements for TRBV7-1 Gene

Promoters and enhancers for TRBV7-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I142331 Enhancer 0.3 dbSUPER 550.8 +0.4 449 1.4 ZBTB17 TRBV7-1 LOC105375539 TRB
GH07I142329 Enhancer 0.3 dbSUPER 0.8 -3.4 -3405 1 POLR2A TRBV6-1 TRBV7-1 LOC105375539 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV7-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV7-1 Gene

Genomic Locations for TRBV7-1 Gene
chr7:142,332,182-142,332,701
(GRCh38/hg38)
Size:
520 bases
Orientation:
Plus strand
chr7:142,032,006-142,032,527
(GRCh37/hg19)

Genomic View for TRBV7-1 Gene

Genes around TRBV7-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV7-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV7-1 Gene

Proteins for TRBV7-1 Gene

  • Protein details for TRBV7-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A6YYK4
    Recommended name:
    T-cell receptor beta variable 7-1 (non-functional)
    Protein Accession:
    A0A0A6YYK4

    Protein attributes for TRBV7-1 Gene

    Size:
    115 amino acids
    Molecular mass:
    12595 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV7-1 Gene

Post-translational modifications for TRBV7-1 Gene

No Post-translational modifications

Other Protein References for TRBV7-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV7-1 Gene

Domains & Families for TRBV7-1 Gene

Gene Families for TRBV7-1 Gene

Protein Domains for TRBV7-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV7-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV7-1 Gene

Function for TRBV7-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV7-1 Gene

Localization for TRBV7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV7-1 Gene

Pathways & Interactions for TRBV7-1 Gene

SuperPathways for TRBV7-1 Gene

No Data Available

Interacting Proteins for TRBV7-1 Gene

Gene Ontology (GO) - Biological Process for TRBV7-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV7-1 Gene

Drugs & Compounds for TRBV7-1 Gene

No Compound Related Data Available

Transcripts for TRBV7-1 Gene

mRNA/cDNA for TRBV7-1 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV7-1 Gene

No ASD Table

Relevant External Links for TRBV7-1 Gene

GeneLoc Exon Structure for
TRBV7-1
ECgene alternative splicing isoforms for
TRBV7-1

Expression for TRBV7-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV7-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV7-1 Gene

This gene is overexpressed in Testis (x41.0) and Pancreas (x4.3).
genes like me logo Genes that share expression patterns with TRBV7-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV7-1 Gene

Orthologs for TRBV7-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV7-1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TRBV7-1 34
  • 82 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 34
  • 59 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 34
  • 51 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 51 (a)
ManyToMany
-- 34
  • 47 (a)
ManyToMany
-- 34
  • 38 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 37 (a)
OneToMany
Species where no ortholog for TRBV7-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV7-1 Gene

ENSEMBL:
Gene Tree for TRBV7-1 (if available)
TreeFam:
Gene Tree for TRBV7-1 (if available)

Paralogs for TRBV7-1 Gene

Variants for TRBV7-1 Gene

Additional Variant Information for TRBV7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV7-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV7-1 Gene

Disorders for TRBV7-1 Gene

Additional Disease Information for TRBV7-1

No disorders were found for TRBV7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV7-1 Gene

Publications for TRBV7-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 58
  2. Human Tcrb-V6.10 is a pseudogene with Alu repetitive sequences in the promoter region. (PMID: 8381389) Li Y … Posnett DN (Immunogenetics 1993) 3 58
  3. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. (PMID: 1404388) Tomlinson IM … Winter G (Journal of molecular biology 1992) 3 58
  4. The genomic structure of human V beta 6 T cell antigen receptor genes. (PMID: 1660526) Li Y … Posnett DN (The Journal of experimental medicine 1991) 3 58

Products for TRBV7-1 Gene

Sources for TRBV7-1 Gene

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