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Aliases for TRBV6-2 Gene

Aliases for TRBV6-2 Gene

  • T-Cell Receptor Beta Variable 6-2 (Gene/Pseudogene) 2 5
  • T Cell Receptor Beta Variable 6-2 (Gene/Pseudogene) 2 3
  • T Cell Receptor Beta Variable 6-2 2
  • V_segment Translation Product 3
  • TCRBV13S2A1T 3
  • TCRBV13S2 3
  • TCRBV6S2 3
  • TRBV62 3

External Ids for TRBV6-2 Gene

Previous GeneCards Identifiers for TRBV6-2 Gene

  • GC07U990228
  • GC07P141379
  • GC07P141456
  • GC07P141502
  • GC07P141696
  • GC07Pg41387
  • GC07P141387
  • GC07P142874
  • GC07P143008
  • GC07P143077
  • GC07P143227
  • GC07P143424

Summaries for TRBV6-2 Gene

GeneCards Summary for TRBV6-2 Gene

TRBV6-2 (T-Cell Receptor Beta Variable 6-2 (Gene/Pseudogene)) is a Protein Coding gene. An important paralog of this gene is TRBV6-1.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV6-2 Gene

Genomics for TRBV6-2 Gene

Regulatory Elements for TRBV6-2 Gene

Enhancers for TRBV6-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G142345 0.8 Ensembl ENCODE dbSUPER 0.7 -3.2 -3192 0.3 TRBV4-2 TRBV6-2
GH07G142347 0.4 dbSUPER 0.7 -1.2 -1245 0.1 CEBPG TRBV6-2 TRBV4-2
GH07G142348 0.4 dbSUPER 0.7 -1.6 -1613 0.2 CEBPG TRBV4-2 TRBV6-2
GH07G142350 0.4 dbSUPER 0.7 -0.8 -821 0.1 ZNF34 SMARCA4 TRBV4-2 TRBV6-2
GH07G142351 0.4 dbSUPER 0.7 -0.8 -821 0.1 ZNF34 SMARCA4 TRBV4-2 TRBV6-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV6-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV6-2 Gene

Chromosome:
7
Start:
142,349,152 bp from pter
End:
142,349,664 bp from pter
Size:
513 bases
Orientation:
Plus strand

Genomic View for TRBV6-2 Gene

Genes around TRBV6-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV6-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV6-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV6-2 Gene

Proteins for TRBV6-2 Gene

  • Protein details for TRBV6-2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0J9YXY3
    Recommended name:
    T-cell receptor beta variable 6-2 (gene/pseudogene)
    Protein Accession:
    A0A0J9YXY3
    Secondary Accessions:
    • A0A588

    Protein attributes for TRBV6-2 Gene

    Size:
    114 amino acids
    Molecular mass:
    12525 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV6-2 Gene

Post-translational modifications for TRBV6-2 Gene

No Post-translational modifications

Other Protein References for TRBV6-2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV6-2 Gene

Domains & Families for TRBV6-2 Gene

Gene Families for TRBV6-2 Gene

Protein Domains for TRBV6-2 Gene

Suggested Antigen Peptide Sequences for TRBV6-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV6-2: view

No data available for UniProtKB/Swiss-Prot for TRBV6-2 Gene

Function for TRBV6-2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV6-2 Gene

Localization for TRBV6-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV6-2 Gene

Pathways & Interactions for TRBV6-2 Gene

SuperPathways for TRBV6-2 Gene

No Data Available

Interacting Proteins for TRBV6-2 Gene

Gene Ontology (GO) - Biological Process for TRBV6-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV6-2 Gene

Transcripts for TRBV6-2 Gene

mRNA/cDNA for TRBV6-2 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV6-2 Gene

No ASD Table

Relevant External Links for TRBV6-2 Gene

GeneLoc Exon Structure for
TRBV6-2
ECgene alternative splicing isoforms for
TRBV6-2

Expression for TRBV6-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV6-2 Gene

Orthologs for TRBV6-2 Gene

Evolution for TRBV6-2 Gene

ENSEMBL:
Gene Tree for TRBV6-2 (if available)
TreeFam:
Gene Tree for TRBV6-2 (if available)

No data available for Orthologs for TRBV6-2 Gene

Paralogs for TRBV6-2 Gene

Variants for TRBV6-2 Gene

Relevant External Links for TRBV6-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV6-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV6-2 Gene

Disorders for TRBV6-2 Gene

Relevant External Links for TRBV6-2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRBV6-2

No disorders were found for TRBV6-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV6-2 Gene

Publications for TRBV6-2 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 64
  2. Accurate detection of the tumor clone in peripheral T-cell lymphoma biopsies by flow cytometric analysis of TCR-VI^ repertoire. (PMID: 22627740) Salameire D. … Jacob M.C. (Mod. Pathol. 2012) 3 64
  3. The genomic structure of human V beta 6 T cell antigen receptor genes. (PMID: 1660526) Li Y. … Posnett D.N. (J. Exp. Med. 1991) 3 64

Products for TRBV6-2 Gene

Sources for TRBV6-2 Gene

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