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Aliases for TRBV5-8 Gene

Aliases for TRBV5-8 Gene

  • T-Cell Receptor Beta Variable 5-8 2
  • T Cell Receptor Beta Variable 5-8 2 3
  • V_segment Translation Product 3
  • TCRBV5S4A2T 3
  • TCRBV5S8 3
  • TRBV58 3

External Ids for TRBV5-8 Gene

Previous GeneCards Identifiers for TRBV5-8 Gene

  • GC07U990230
  • GC07P141592
  • GC07P141669
  • GC07P141717
  • GC07P141719
  • GC07P141916
  • GC07P141921
  • GC07P141942
  • GC07Pg41600
  • GC07P141604

Summaries for TRBV5-8 Gene

GeneCards Summary for TRBV5-8 Gene

TRBV5-8 (T-Cell Receptor Beta Variable 5-8) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV5-8 Gene

Genomics for TRBV5-8 Gene

Regulatory Elements for TRBV5-8 Gene

Enhancers for TRBV5-8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G000521 1.2 ENCODE dbSUPER 0.7 -1.7 -1686 1.9 GLIS2 REST MEF2D SMARCA4 GLIS1 KDM1A SP7 CTCF ZNF777 KLF1 HRAT92 TRBV5-8 PDGFA
GH07G000537 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.3 15289 3.5 PKNOX1 ARID4B SIN3A DMAP1 ZBTB7B GLIS2 GATA2 ZNF143 FOS SP5 PDGFA GET4 PRKAR1B DNAAF5 GC07P000552 TRBV5-8
GH07G000525 1 dbSUPER 0.7 +2.4 2405 2.0 HDGF ATF1 ZNF133 ZNF493 ZFP64 GLI4 YBX1 ZBTB7B TCF12 ZNF121 HRAT92 ENSG00000273230 ADAP1 TRBV5-8 GC07P000552
GH07G000523 1 ENCODE dbSUPER 0.7 +0.1 57 0.2 TAL1 ZSCAN4 PAX8 TCF12 FOXM1 ZNF766 GATA2 NCOR1 TRIM24 L3MBTL2 HRAT92 TRBV5-8 GC07P000552
GH07G000522 0.9 ENCODE dbSUPER 0.7 -2.7 -2724 0.2 KLF1 GATAD2B RBBP5 HDAC2 ZBTB48 KDM5B MLLT1 ZSCAN29 ZBTB33 EZH2 PDGFA TRBV5-8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV5-8 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV5-8 Gene

Chromosome:
7
Start:
523,822 bp from pter
End:
524,288 bp from pter
Size:
467 bases
Orientation:
Plus strand

Genomic View for TRBV5-8 Gene

Genes around TRBV5-8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for TRBV5-8 Gene

Proteins for TRBV5-8 Gene

  • Protein details for TRBV5-8 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A5A2
    Recommended name:
    T-cell receptor beta variable 5-8
    Protein Accession:
    A0A5A2

    Protein attributes for TRBV5-8 Gene

    Size:
    114 amino acids
    Molecular mass:
    12721 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV5-8 Gene

Post-translational modifications for TRBV5-8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRBV5-8 Gene

Domains & Families for TRBV5-8 Gene

Gene Families for TRBV5-8 Gene

Protein Domains for TRBV5-8 Gene

Suggested Antigen Peptide Sequences for TRBV5-8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV5-8: view

No data available for UniProtKB/Swiss-Prot for TRBV5-8 Gene

Function for TRBV5-8 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV5-8 Gene

Localization for TRBV5-8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV5-8 Gene

Pathways & Interactions for TRBV5-8 Gene

SuperPathways for TRBV5-8 Gene

No Data Available

Interacting Proteins for TRBV5-8 Gene

Gene Ontology (GO) - Biological Process for TRBV5-8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV5-8 Gene

Drugs & Compounds for TRBV5-8 Gene

No Compound Related Data Available

Transcripts for TRBV5-8 Gene

mRNA/cDNA for TRBV5-8 Gene

(1) Selected AceView cDNA sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV5-8 Gene

No ASD Table

Relevant External Links for TRBV5-8 Gene

GeneLoc Exon Structure for
TRBV5-8
ECgene alternative splicing isoforms for
TRBV5-8

Expression for TRBV5-8 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV5-8 Gene

Orthologs for TRBV5-8 Gene

No data available for Orthologs and Evolution for TRBV5-8 Gene

Paralogs for TRBV5-8 Gene

No data available for Paralogs for TRBV5-8 Gene

Variants for TRBV5-8 Gene

Relevant External Links for TRBV5-8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV5-8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV5-8 Gene

Disorders for TRBV5-8 Gene

No disorders were found for TRBV5-8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV5-8 Gene

Publications for TRBV5-8 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 64

Products for TRBV5-8 Gene

Sources for TRBV5-8 Gene

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