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Aliases for TRBV30 Gene

Aliases for TRBV30 Gene

  • T Cell Receptor Beta Variable 30 (Gene/Pseudogene) 2 3 5
  • T Cell Receptor Beta Variable 30 2
  • V_segment Translation Product 3
  • TCRBV20S1A1N2 3
  • TCRBV30S1 3

External Ids for TRBV30 Gene

Previous GeneCards Identifiers for TRBV30 Gene

  • GC07U990180
  • GC07M141904
  • GC07M141981
  • GC07M142027
  • GC07M142220
  • GC07M142494
  • GC07M142512

Summaries for TRBV30 Gene

GeneCards Summary for TRBV30 Gene

TRBV30 (T Cell Receptor Beta Variable 30 (Gene/Pseudogene)) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV30 Gene

Genomics for TRBV30 Gene

Regulatory Elements for TRBV30 Gene

Enhancers for TRBV30 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F142812 0.8 ENCODE 26.7 +0.2 202 2.6 KLF1 RFX1 JUN WRNIP1 TEAD4 DPF2 REST EBF1 TEAD3 GATA3 TRBV30 TRPV6 EPHB6 TRBV7-3 TRPV5 GC07M142813 LOC105375541
GH07F142805 1.2 FANTOM5 ENCODE 23.8 +4.9 4889 5.3 HDGF PKNOX1 WRNIP1 ELK1 GATA2 ZNF143 FOS ZNF263 MCM5 JUNB TRBV30 TRPV6 GSTK1 EPHB6 TCAF1P1 TRPV5 CASP2 GC07M142813 TRBJ2-7
GH07F142853 0.7 FANTOM5 ENCODE 11.3 -41.8 -41785 3.2 HDGF ZNF76 KLF17 RAD21 ZNF121 GLIS2 SCRT2 ZNF143 KLF7 KDM4B EPHB6 TRBV30 GC07P143501
GH07F142803 1.1 FANTOM5 ENCODE 10.8 +8.9 8913 1.6 HDGF ZNF687 MTA2 TAL1 TBX21 ZBTB7A ARID1B RUNX1 NCOR1 POLR2A TRBV30 OR9A2 CASP2 TAS2R39 EPHB6 GC07M142813 TRBJ2-7
GH07F142926 1 Ensembl ENCODE 5.4 -114.1 -114102 1.8 MAX CEBPB KEL C7orf34 EPHB6 OR6V1 OR9P1P TRBV30 TRPV5 TRPV6
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRBV30 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV30 Gene

Chromosome:
7
Start:
142,812,586 bp from pter
End:
142,813,399 bp from pter
Size:
814 bases
Orientation:
Minus strand

Genomic View for TRBV30 Gene

Genes around TRBV30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV30 Gene

Proteins for TRBV30 Gene

  • Protein details for TRBV30 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0K0K1B3
    Recommended name:
    Protein TRBV30
    Protein Accession:
    A0A0K0K1B3
    Secondary Accessions:
    • A0A075B6Q1
    • A0A0A6YYU8
    • A0A5C0

    Protein attributes for TRBV30 Gene

    Size:
    111 amino acids
    Molecular mass:
    12225 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV30 Gene

Post-translational modifications for TRBV30 Gene

No Post-translational modifications

Other Protein References for TRBV30 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV30 Gene

Domains & Families for TRBV30 Gene

Gene Families for TRBV30 Gene

Protein Domains for TRBV30 Gene

Suggested Antigen Peptide Sequences for TRBV30 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV30: view

No data available for UniProtKB/Swiss-Prot for TRBV30 Gene

Function for TRBV30 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV30 Gene

Localization for TRBV30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV30 Gene

Pathways & Interactions for TRBV30 Gene

SuperPathways for TRBV30 Gene

No Data Available

Interacting Proteins for TRBV30 Gene

Gene Ontology (GO) - Biological Process for TRBV30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV30 Gene

Transcripts for TRBV30 Gene

mRNA/cDNA for TRBV30 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV30 Gene

No ASD Table

Relevant External Links for TRBV30 Gene

GeneLoc Exon Structure for
TRBV30
ECgene alternative splicing isoforms for
TRBV30

Expression for TRBV30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRBV30 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV30 Gene

This gene is overexpressed in Whole Blood (x29.3), Small Intestine - Terminal Ileum (x5.9), and Spleen (x5.2).

NURSA nuclear receptor signaling pathways regulating expression of TRBV30 Gene:

TRBV30
genes like me logo Genes that share expression patterns with TRBV30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRBV30 Gene

Orthologs for TRBV30 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRBV30 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia TRBV30 35
  • 70 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TRBV30 35
  • 56 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TRBV30 35
  • 53 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia TRBV30 35
  • 36 (a)
OneToOne
Species where no ortholog for TRBV30 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV30 Gene

ENSEMBL:
Gene Tree for TRBV30 (if available)
TreeFam:
Gene Tree for TRBV30 (if available)

Paralogs for TRBV30 Gene

No data available for Paralogs for TRBV30 Gene

Variants for TRBV30 Gene

Relevant External Links for TRBV30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV30 Gene

Disorders for TRBV30 Gene

Relevant External Links for TRBV30

Genetic Association Database (GAD)
TRBV30

No disorders were found for TRBV30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV30 Gene

Publications for TRBV30 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 64

Products for TRBV30 Gene

Sources for TRBV30 Gene

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