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Aliases for TRBV3-1 Gene

Aliases for TRBV3-1 Gene

  • T-Cell Receptor Beta Variable 3-1 2 5
  • T Cell Receptor Beta Variable 3-1 2 3
  • V_segment Translation Product 3
  • TCRBV9S1A1T 3
  • TCRBV3S1 3
  • TRBV31 3

External Ids for TRBV3-1 Gene

Previous GeneCards Identifiers for TRBV3-1 Gene

  • GC07U990242
  • GC07P141338
  • GC07P141415
  • GC07P141461
  • GC07P141654
  • GC07P142157
  • GC07P142183
  • GC07P142311
  • GC07P142339
  • GC07P142406
  • GC07P142454
  • GC07P142580
  • GC07P142671
  • GC07P142738
  • GC07P142801
  • GC07P142588
  • GC07P142832
  • GC07P142993
  • GC07P143145
  • GC07P143345
  • GC07P143490

Summaries for TRBV3-1 Gene

GeneCards Summary for TRBV3-1 Gene

TRBV3-1 (T-Cell Receptor Beta Variable 3-1) is a Protein Coding gene. An important paralog of this gene is TRBV4-2.

Additional gene information for TRBV3-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV3-1 Gene

Genomics for TRBV3-1 Gene

Regulatory Elements for TRBV3-1 Gene

Enhancers for TRBV3-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H142303 0.6 ENCODE dbSUPER 0.7 -4.8 -4768 0.1 CTCF TRBV2 TRBV3-1
GH07H142308 0.5 Ensembl dbSUPER 0.7 0.0 -42 0.2 TRBV3-1 TRBV2
GH07H142313 0.5 ENCODE dbSUPER 0.7 +3.9 3932 0 TRBV3-1 TRBV4-1
GH07H142307 0.4 FANTOM5 0.7 -0.9 -889 0.1 REST TRY2P TAS2R38 OR9A4 TRBV3-1 TRBV2
GH07H142301 0.7 Ensembl dbSUPER 0.4 -7.3 -7342 0.4 CTCF POLR2A TRBV2 TRBV3-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV3-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV3-1 Gene

Genomic Locations for TRBV3-1 Gene
507 bases
Plus strand

Genomic View for TRBV3-1 Gene

Genes around TRBV3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV3-1 Gene

Proteins for TRBV3-1 Gene

  • Protein details for TRBV3-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    T-cell receptor beta variable 3-1
    Protein Accession:

    Protein attributes for TRBV3-1 Gene

    114 amino acids
    Molecular mass:
    12928 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV3-1 Gene

Post-translational modifications for TRBV3-1 Gene

No Post-translational modifications

Other Protein References for TRBV3-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV3-1 Gene

Domains & Families for TRBV3-1 Gene

Gene Families for TRBV3-1 Gene

Protein Domains for TRBV3-1 Gene

Suggested Antigen Peptide Sequences for TRBV3-1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV3-1: view

No data available for UniProtKB/Swiss-Prot for TRBV3-1 Gene

Function for TRBV3-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV3-1 Gene

Localization for TRBV3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV3-1 Gene

Pathways & Interactions for TRBV3-1 Gene

SuperPathways for TRBV3-1 Gene

No Data Available

Interacting Proteins for TRBV3-1 Gene

Gene Ontology (GO) - Biological Process for TRBV3-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRBV3-1 Gene

Drugs & Compounds for TRBV3-1 Gene

No Compound Related Data Available

Transcripts for TRBV3-1 Gene

mRNA/cDNA for TRBV3-1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV3-1 Gene

No ASD Table

Relevant External Links for TRBV3-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRBV3-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV3-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV3-1 Gene

This gene is overexpressed in Whole Blood (x33.1) and Spleen (x5.0).
genes like me logo Genes that share expression patterns with TRBV3-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV3-1 Gene

Orthologs for TRBV3-1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRBV3-1 Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia TRBV3-1 34
  • 53 (a)
(Monodelphis domestica)
Mammalia -- 34
  • 53 (a)
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 37 (a)
(Bos Taurus)
Mammalia TRB@ 34
  • 31 (a)
(Gallus gallus)
Aves -- 34
  • 26 (a)
-- 34
  • 22 (a)
-- 34
  • 20 (a)
(Anolis carolinensis)
Reptilia -- 34
  • 38 (a)
-- 34
  • 24 (a)
Species where no ortholog for TRBV3-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV3-1 Gene

Gene Tree for TRBV3-1 (if available)
Gene Tree for TRBV3-1 (if available)

Paralogs for TRBV3-1 Gene

Variants for TRBV3-1 Gene

Relevant External Links for TRBV3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV3-1 Gene

Disorders for TRBV3-1 Gene

Relevant External Links for TRBV3-1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for TRBV3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV3-1 Gene

Publications for TRBV3-1 Gene

  1. TCRBV20S1 and TCRBV3S1 gene segment polymorphisms in systemic sclerosis. (PMID: 18412309) Bredemeier M … Xavier RM (The Journal of rheumatology 2008) 3 45 60
  2. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 60
  3. A polymorphism in a staphylococcal enterotoxin receptor gene (T cell receptor BV3 recombination signal sequence) is not associated with unexplained sudden unexpected death in infancy in an Australian cohort. (PMID: 20362046) Highet AR … Goldwater PN (Microbial pathogenesis 2010) 3 60
  4. TCRBV3S1 and TCRBV18 gene segment polymorphisms in Brazilian Caucasoid and Black populations. (PMID: 11841483) Dresch C … Chies JA (European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics 2002) 3 60
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for TRBV3-1 Gene

Sources for TRBV3-1 Gene

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