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Aliases for TRBV29OR9-2 Gene

Aliases for TRBV29OR9-2 Gene

  • T-Cell Receptor Beta Variable 29/OR9-2 (Non-Functional) 2 5
  • T-Cell Receptor, Beta Cluster, Variable Region 4, Orphon 2 3
  • T Cell Receptor Beta Variable 29/OR9-2 (Non-Functional) 2 3
  • T Cell Receptor Beta Variable 29/OR9-2 Pseudogene 3
  • T-Cell Receptor, Beta Variable Region 4, Orphon 2
  • T Cell Receptor Beta Variable 29/OR9-2 2
  • TRBV29/OR9-2 3
  • TCRBV29S2 3
  • TCRBV4S2O 3
  • TCRBV4O 3

External Ids for TRBV29OR9-2 Gene

Previous HGNC Symbols for TRBV29OR9-2 Gene

  • TCRBV4O

Previous GeneCards Identifiers for TRBV29OR9-2 Gene

  • GC09U990068
  • GC09P033776
  • GC09P033787
  • GC09P033788
  • GC09P033794
  • GC09P033828
  • GC09P033853
  • GC09P033888
  • GC09P033917
  • GC09P033956
  • GC09P033993
  • GC09P034029

Summaries for TRBV29OR9-2 Gene

GeneCards Summary for TRBV29OR9-2 Gene

TRBV29OR9-2 (T-Cell Receptor Beta Variable 29/OR9-2 (Non-Functional)) is a Pseudogene.

Additional gene information for TRBV29OR9-2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV29OR9-2 Gene

Genomics for TRBV29OR9-2 Gene

Regulatory Elements for TRBV29OR9-2 Gene

Enhancers for TRBV29OR9-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H033778 1.3 Ensembl ENCODE dbSUPER 0.4 -6.6 -6581 2 CTCF PKNOX1 JUN ZNF2 RAD21 ZNF7 YY1 ZNF791 PATZ1 SMC3 UBE2R2 SMU1 TCEA1P4 NFX1 ENSG00000260947 TRBV29OR9-2 PRSS3
GH09H033749 1.3 Ensembl ENCODE dbSUPER 0.3 -34.3 -34301 4 SOX13 TFAP4 FOXA2 SAP130 ARID4B MAX CEBPG YY1 EGR1 HNF4G ENSG00000260947 TRBV26OR9-2 RNU4ATAC11P UBE2R2 UBAP2 LINC01251 PRSS3 ENSG00000227301 NOL6 TRBV29OR9-2
GH09H033769 0.9 ENCODE dbSUPER 0.4 -15.7 -15729 2 ZNF146 JUN KLF17 EP300 ZFP69B JUND GATA3 POLR2A ZNF692 ZNF629 ENSG00000260947 LINC01251 TRBV29OR9-2 PRSS3
GH09H033766 0.9 ENCODE dbSUPER 0.4 -18.7 -18658 1 ZNF639 ZEB2 ZNF843 ATF2 ZEB1 HIC1 JUND ZNF366 GLIS1 ZNF629 ENSG00000260947 LINC01251 PRSS3 TRBV29OR9-2
GH09H033774 0.7 ENCODE dbSUPER 0.4 -11.7 -11677 0 MAX SPI1 TRBV29OR9-2 PRSS3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV29OR9-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV29OR9-2 Gene

Chromosome:
9
Start:
33,786,221 bp from pter
End:
33,786,828 bp from pter
Size:
608 bases
Orientation:
Plus strand

Genomic View for TRBV29OR9-2 Gene

Genes around TRBV29OR9-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV29OR9-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV29OR9-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV29OR9-2 Gene

Proteins for TRBV29OR9-2 Gene

Post-translational modifications for TRBV29OR9-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRBV29OR9-2 Gene

Domains & Families for TRBV29OR9-2 Gene

Gene Families for TRBV29OR9-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV29OR9-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV29OR9-2 Gene

Function for TRBV29OR9-2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRBV29OR9-2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV29OR9-2 Gene

Localization for TRBV29OR9-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV29OR9-2 Gene

Pathways & Interactions for TRBV29OR9-2 Gene

SuperPathways for TRBV29OR9-2 Gene

No Data Available

Interacting Proteins for TRBV29OR9-2 Gene

Gene Ontology (GO) - Biological Process for TRBV29OR9-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV29OR9-2 Gene

Drugs & Compounds for TRBV29OR9-2 Gene

No Compound Related Data Available

Transcripts for TRBV29OR9-2 Gene

mRNA/cDNA for TRBV29OR9-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRBV29OR9-2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV29OR9-2 Gene

No ASD Table

Relevant External Links for TRBV29OR9-2 Gene

GeneLoc Exon Structure for
TRBV29OR9-2
ECgene alternative splicing isoforms for
TRBV29OR9-2

Expression for TRBV29OR9-2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV29OR9-2 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV29OR9-2 Gene

This gene is overexpressed in Pancreas (x22.1) and Esophagus - Mucosa (x4.4).
genes like me logo Genes that share expression patterns with TRBV29OR9-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV29OR9-2 Gene

Orthologs for TRBV29OR9-2 Gene

Evolution for TRBV29OR9-2 Gene

ENSEMBL:
Gene Tree for TRBV29OR9-2 (if available)
TreeFam:
Gene Tree for TRBV29OR9-2 (if available)

No data available for Orthologs for TRBV29OR9-2 Gene

Paralogs for TRBV29OR9-2 Gene

No data available for Paralogs for TRBV29OR9-2 Gene

Variants for TRBV29OR9-2 Gene

Relevant External Links for TRBV29OR9-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV29OR9-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV29OR9-2 Gene

Disorders for TRBV29OR9-2 Gene

No disorders were found for TRBV29OR9-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV29OR9-2 Gene

Publications for TRBV29OR9-2 Gene

  1. Organization of human T-cell receptor beta-chain genes: clusters of V beta genes are present on chromosomes 7 and 9. (PMID: 8384723) Robinson MA … Concannon P (Proceedings of the National Academy of Sciences of the United States of America 1993) 2 3 60

Products for TRBV29OR9-2 Gene

Sources for TRBV29OR9-2 Gene

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