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Aliases for TRBV29OR9-2 Gene

Aliases for TRBV29OR9-2 Gene

  • T Cell Receptor Beta Variable 29/OR9-2 (Non-Functional) 2 3
  • T-Cell Receptor, Beta Cluster, Variable Region 4, Orphon 2 3
  • TCRBV4O 2 3
  • T-Cell Receptor Beta Variable 29/OR9-2 (Non-Functional) 5
  • T Cell Receptor Beta Variable 29/OR9-2 Pseudogene 3
  • T-Cell Receptor, Beta Variable Region 4, Orphon 2
  • TRBV29/OR9-2 3
  • TCRBV29S2 3
  • TCRBV4S2O 3

External Ids for TRBV29OR9-2 Gene

Previous HGNC Symbols for TRBV29OR9-2 Gene

  • TCRBV4O

Previous GeneCards Identifiers for TRBV29OR9-2 Gene

  • GC09U990068
  • GC09P033776
  • GC09P033787
  • GC09P033788
  • GC09P033794
  • GC09P033828
  • GC09P033853
  • GC09P033888
  • GC09P033917
  • GC09P033956
  • GC09P033993
  • GC09P034029
  • GC09P034075

Summaries for TRBV29OR9-2 Gene

GeneCards Summary for TRBV29OR9-2 Gene

TRBV29OR9-2 (T Cell Receptor Beta Variable 29/OR9-2 (Non-Functional)) is a Pseudogene.

Additional gene information for TRBV29OR9-2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV29OR9-2 Gene

Genomics for TRBV29OR9-2 Gene

GeneHancer (GH) Regulatory Elements for TRBV29OR9-2 Gene

Promoters and enhancers for TRBV29OR9-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I033786 Enhancer 0.5 dbSUPER 550.8 +0.4 426 0.7 E2F1 CTCF SAP130 L3MBTL2 GC09P034201 TRBV29OR9-2 SNORD121B UBAP2 UBE2R2-AS1 UBE2R2 PRSS3
GH09I033787 Enhancer 0.3 dbSUPER 550.8 +1.6 1588 0.6 CTCF GC09P034201 TRBV29OR9-2 SNORD121B UBAP2 NUDT2 UBE2R2 UBE2R2-AS1 PRSS3
GH09I033749 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.3 -34.3 -34300 4.2 SOX13 TFAP4 FOXA2 SAP130 ARID4B MAX CEBPG YY1 EGR1 HNF4G PRSS3 ENSG00000260947 TRBV26OR9-2 RNU4ATAC11P UBE2R2 UBAP2 LINC01251 ENSG00000227301 NOL6 TRBV29OR9-2
GH09I033778 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -6.6 -6580 2 MEIS2 CTCF PKNOX1 JUN ZNF2 RAD21 ZNF7 YY1 ZNF791 PATZ1 UBE2R2 SMU1 TCEA1P4 NFX1 ENSG00000260947 TRBV29OR9-2 PRSS3
GH09I033766 Enhancer 0.8 ENCODE dbSUPER 0.4 -18.7 -18657 1.3 ZNF639 ZNF189 ZEB2 ZNF843 ATF2 ZEB1 HIC1 ZNF335 JUND ZNF366 ENSG00000260947 LINC01251 PRSS3 TRBV29OR9-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV29OR9-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV29OR9-2 Gene

Genomic Locations for TRBV29OR9-2 Gene
chr9:33,786,221-33,786,828
(GRCh38/hg38)
Size:
608 bases
Orientation:
Plus strand
chr9:33,786,219-33,786,826
(GRCh37/hg19)

Genomic View for TRBV29OR9-2 Gene

Genes around TRBV29OR9-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV29OR9-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV29OR9-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV29OR9-2 Gene

Proteins for TRBV29OR9-2 Gene

Post-translational modifications for TRBV29OR9-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRBV29OR9-2 Gene

Domains & Families for TRBV29OR9-2 Gene

Gene Families for TRBV29OR9-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV29OR9-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV29OR9-2 Gene

Function for TRBV29OR9-2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV29OR9-2 Gene

Localization for TRBV29OR9-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV29OR9-2 Gene

Pathways & Interactions for TRBV29OR9-2 Gene

SuperPathways for TRBV29OR9-2 Gene

No Data Available

Interacting Proteins for TRBV29OR9-2 Gene

Gene Ontology (GO) - Biological Process for TRBV29OR9-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV29OR9-2 Gene

Drugs & Compounds for TRBV29OR9-2 Gene

No Compound Related Data Available

Transcripts for TRBV29OR9-2 Gene

mRNA/cDNA for TRBV29OR9-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV29OR9-2 Gene

No ASD Table

Relevant External Links for TRBV29OR9-2 Gene

GeneLoc Exon Structure for
TRBV29OR9-2
ECgene alternative splicing isoforms for
TRBV29OR9-2

Expression for TRBV29OR9-2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV29OR9-2 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV29OR9-2 Gene

This gene is overexpressed in Pancreas (x22.1) and Esophagus - Mucosa (x4.4).
genes like me logo Genes that share expression patterns with TRBV29OR9-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV29OR9-2 Gene

Orthologs for TRBV29OR9-2 Gene

Evolution for TRBV29OR9-2 Gene

ENSEMBL:
Gene Tree for TRBV29OR9-2 (if available)
TreeFam:
Gene Tree for TRBV29OR9-2 (if available)

No data available for Orthologs for TRBV29OR9-2 Gene

Paralogs for TRBV29OR9-2 Gene

No data available for Paralogs for TRBV29OR9-2 Gene

Variants for TRBV29OR9-2 Gene

Additional Variant Information for TRBV29OR9-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV29OR9-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV29OR9-2 Gene

Disorders for TRBV29OR9-2 Gene

No disorders were found for TRBV29OR9-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV29OR9-2 Gene

Publications for TRBV29OR9-2 Gene

  1. Organization of human T-cell receptor beta-chain genes: clusters of V beta genes are present on chromosomes 7 and 9. (PMID: 8384723) Robinson MA … Concannon P (Proceedings of the National Academy of Sciences of the United States of America 1993) 2 3 58

Products for TRBV29OR9-2 Gene

Sources for TRBV29OR9-2 Gene

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