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Aliases for TRBV29-1 Gene

Aliases for TRBV29-1 Gene

  • T Cell Receptor Beta Variable 29-1 2 3
  • T-Cell Receptor Beta Variable 29-1 5
  • V_segment Translation Product 3
  • TCRBV4S1A1T 3
  • TCRBV29S1 3
  • TRBV291 3

External Ids for TRBV29-1 Gene

Previous GeneCards Identifiers for TRBV29-1 Gene

  • GC07U990181
  • GC07P141811
  • GC07P141897
  • GC07P141900
  • GC07P141934
  • GC07P142129
  • GC07P142139
  • GC07Pg41819
  • GC07P142450
  • GC07P142451
  • GC07P142491
  • GC07P142648
  • GC07P142718
  • GC07P142778
  • GC07P142842
  • GC07P142891
  • GC07P143021
  • GC07P143170
  • GC07P143368
  • GC07P143518
  • GC07P143649

Summaries for TRBV29-1 Gene

GeneCards Summary for TRBV29-1 Gene

TRBV29-1 (T Cell Receptor Beta Variable 29-1) is a Protein Coding gene. An important paralog of this gene is TRBV20OR9-2.

Additional gene information for TRBV29-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV29-1 Gene

Genomics for TRBV29-1 Gene

GeneHancer (GH) Regulatory Elements for TRBV29-1 Gene

Promoters and enhancers for TRBV29-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I142742 Enhancer 0.2 ENCODE 550.8 +2.0 1953 0.1 TRBV29-1 PRSS1 PRSS2 TRB
GH07I142722 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -17.5 -17513 1.4 PKNOX1 CREB1 PGBD4P1 TRBV28 TRBV7-3 TRBV29-1 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV29-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV29-1 Gene

Genomic Locations for TRBV29-1 Gene
chr7:142,740,206-142,740,894
(GRCh38/hg38)
Size:
689 bases
Orientation:
Plus strand
chr7:142,448,053-142,448,741
(GRCh37/hg19)

Genomic View for TRBV29-1 Gene

Genes around TRBV29-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV29-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV29-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV29-1 Gene

Proteins for TRBV29-1 Gene

  • Protein details for TRBV29-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A5B7
    Recommended name:
    T-cell receptor beta variable 29-1
    Protein Accession:
    A0A5B7

    Protein attributes for TRBV29-1 Gene

    Size:
    111 amino acids
    Molecular mass:
    12190 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV29-1 Gene

Post-translational modifications for TRBV29-1 Gene

No Post-translational modifications

Other Protein References for TRBV29-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV29-1 Gene

Domains & Families for TRBV29-1 Gene

Gene Families for TRBV29-1 Gene

Protein Domains for TRBV29-1 Gene

Suggested Antigen Peptide Sequences for TRBV29-1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV29-1: view

No data available for UniProtKB/Swiss-Prot for TRBV29-1 Gene

Function for TRBV29-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV29-1 Gene

Localization for TRBV29-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV29-1 Gene

Pathways & Interactions for TRBV29-1 Gene

SuperPathways for TRBV29-1 Gene

No Data Available

Interacting Proteins for TRBV29-1 Gene

Gene Ontology (GO) - Biological Process for TRBV29-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV29-1 Gene

Drugs & Compounds for TRBV29-1 Gene

No Compound Related Data Available

Transcripts for TRBV29-1 Gene

mRNA/cDNA for TRBV29-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV29-1 Gene

No ASD Table

Relevant External Links for TRBV29-1 Gene

GeneLoc Exon Structure for
TRBV29-1
ECgene alternative splicing isoforms for
TRBV29-1

Expression for TRBV29-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV29-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV29-1 Gene

This gene is overexpressed in Whole Blood (x33.4) and Spleen (x4.5).
genes like me logo Genes that share expression patterns with TRBV29-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV29-1 Gene

Orthologs for TRBV29-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV29-1 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 56 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 46 (a)
OneToMany
cow
(Bos Taurus)
Mammalia TRBV29-1 34
  • 28 (a)
OneToOne
Species where no ortholog for TRBV29-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV29-1 Gene

ENSEMBL:
Gene Tree for TRBV29-1 (if available)
TreeFam:
Gene Tree for TRBV29-1 (if available)

Paralogs for TRBV29-1 Gene

Paralogs for TRBV29-1 Gene

Pseudogenes.org Pseudogenes for TRBV29-1 Gene

genes like me logo Genes that share paralogs with TRBV29-1: view

Variants for TRBV29-1 Gene

Additional Variant Information for TRBV29-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV29-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV29-1 Gene

Disorders for TRBV29-1 Gene

No disorders were found for TRBV29-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV29-1 Gene

Publications for TRBV29-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 58

Products for TRBV29-1 Gene

Sources for TRBV29-1 Gene

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