Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRBV27 Gene

Aliases for TRBV27 Gene

  • T Cell Receptor Beta Variable 27 2 3 5
  • V_segment Translation Product 3
  • TCRBV14S1 3
  • TCRBV27S1 3

External Ids for TRBV27 Gene

Previous GeneCards Identifiers for TRBV27 Gene

  • GC07U990183
  • GC07P141786
  • GC07P141863
  • GC07P141904
  • GC07P141910
  • GC07P142102
  • GC07Pg41794
  • GC07P142425
  • GC07P142445
  • GC07P142490
  • GC07P142647
  • GC07P142717
  • GC07P142777
  • GC07P142813
  • GC07P142893

Summaries for TRBV27 Gene

GeneCards Summary for TRBV27 Gene

TRBV27 (T Cell Receptor Beta Variable 27) is a Protein Coding gene. An important paralog of this gene is TRBV15.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV27 Gene

Genomics for TRBV27 Gene

Regulatory Elements for TRBV27 Gene

Enhancers for TRBV27 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRBV27 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV27 Gene

Chromosome:
7
Start:
142,715,346 bp from pter
End:
142,715,861 bp from pter
Size:
516 bases
Orientation:
Plus strand

Genomic View for TRBV27 Gene

Genes around TRBV27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV27 Gene

Proteins for TRBV27 Gene

  • Protein details for TRBV27 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0K0K1C4
    Recommended name:
    Protein TRBV27
    Protein Accession:
    A0A0K0K1C4
    Secondary Accessions:
    • A0A075B6N5
    • A0A0A6YYR2
    • A0A5B5

    Protein attributes for TRBV27 Gene

    Size:
    115 amino acids
    Molecular mass:
    12925 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV27 Gene

Proteomics data for TRBV27 Gene at MOPED

Post-translational modifications for TRBV27 Gene

No Post-translational modifications

Other Protein References for TRBV27 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV27 Gene

Domains & Families for TRBV27 Gene

Gene Families for TRBV27 Gene

Protein Domains for TRBV27 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV27: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV27 Gene

Function for TRBV27 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV27 Gene

Localization for TRBV27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV27 Gene

Pathways & Interactions for TRBV27 Gene

SuperPathways for TRBV27 Gene

No Data Available

Interacting Proteins for TRBV27 Gene

Gene Ontology (GO) - Biological Process for TRBV27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV27 Gene

Drugs & Compounds for TRBV27 Gene

No Compound Related Data Available

Transcripts for TRBV27 Gene

mRNA/cDNA for TRBV27 Gene

(20) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TRBV27 Gene

T cell receptor beta variable 27:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV27 Gene

No ASD Table

Relevant External Links for TRBV27 Gene

GeneLoc Exon Structure for
TRBV27
ECgene alternative splicing isoforms for
TRBV27

Expression for TRBV27 Gene

mRNA expression in normal human tissues for TRBV27 Gene

SOURCE GeneReport for Unigene cluster for TRBV27 Gene Hs.511522

genes like me logo Genes that share expression patterns with TRBV27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRBV27 Gene

Orthologs for TRBV27 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRBV27 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia TRBV27 36
  • 47 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TRBV27 36
  • 38 (a)
OneToOne
chicken
(Gallus gallus)
Aves -- 36
  • 31 (a)
ManyToMany
-- 36
  • 37 (a)
ManyToMany
-- 36
  • 32 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 20 (a)
ManyToMany
-- 36
  • 29 (a)
ManyToMany
Species with no ortholog for TRBV27:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV27 Gene

ENSEMBL:
Gene Tree for TRBV27 (if available)
TreeFam:
Gene Tree for TRBV27 (if available)

Paralogs for TRBV27 Gene

genes like me logo Genes that share paralogs with TRBV27: view

Variants for TRBV27 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRBV27 Gene

Disorders for TRBV27 Gene

Relevant External Links for TRBV27

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRBV27

No disorders were found for TRBV27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV27 Gene

Publications for TRBV27 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for TRBV27 Gene

Sources for TRBV27 Gene

Content