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Aliases for TRBV25OR9-2 Gene

Aliases for TRBV25OR9-2 Gene

  • T-Cell Receptor Beta Variable 25/OR9-2 (Pseudogene) 2 5
  • T Cell Receptor Beta Variable 25/OR9-2 (Pseudogene) 2 3
  • T-Cell Receptor, Beta Variable Region 11, Orphon 2 3
  • T Cell Receptor Beta Variable 25/OR9-2 Pseudogene 2
  • T Cell Receptor Beta Variable 25/OR9-2 2
  • TRBV25/OR9-2 3
  • TCRBV11S2O 3
  • TCRBV25S2 3
  • TCRBV11O 3

External Ids for TRBV25OR9-2 Gene

Previous HGNC Symbols for TRBV25OR9-2 Gene

  • TCRBV11O

Previous GeneCards Identifiers for TRBV25OR9-2 Gene

  • GC09U990070
  • GC09P033652
  • GC09P033664
  • GC09P033620
  • GC09P033673

Summaries for TRBV25OR9-2 Gene

GeneCards Summary for TRBV25OR9-2 Gene

TRBV25OR9-2 (T-Cell Receptor Beta Variable 25/OR9-2 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV25OR9-2 Gene

Genomics for TRBV25OR9-2 Gene

Regulatory Elements for TRBV25OR9-2 Gene

Enhancers for TRBV25OR9-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G033675 0.9 ENCODE 0.4 +14.7 14651 1.9 RB1 SIN3A YY1 ZNF335 GLIS2 ZNF280D YY2 CEBPB REST ZNF398 ENSG00000260947 LINC01251 NUDT2 PTENP1-AS TRBV25OR9-2
GH09G033655 0.3 FANTOM5 0.4 -6.2 -6153 0.1 PRSS3P4 TRBV24OR9-2 TRBV25OR9-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV25OR9-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV25OR9-2 Gene

Chromosome:
9
Start:
33,662,166 bp from pter
End:
33,662,664 bp from pter
Size:
499 bases
Orientation:
Plus strand

Genomic View for TRBV25OR9-2 Gene

Genes around TRBV25OR9-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV25OR9-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV25OR9-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV25OR9-2 Gene

Proteins for TRBV25OR9-2 Gene

Post-translational modifications for TRBV25OR9-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRBV25OR9-2 Gene

Domains & Families for TRBV25OR9-2 Gene

Gene Families for TRBV25OR9-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV25OR9-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV25OR9-2 Gene

Function for TRBV25OR9-2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV25OR9-2 Gene

Localization for TRBV25OR9-2 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for TRBV25OR9-2 gene
Compartment Confidence
nucleus 2
cytosol 2
extracellular 1
mitochondrion 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TRBV25OR9-2 Gene

Pathways & Interactions for TRBV25OR9-2 Gene

SuperPathways for TRBV25OR9-2 Gene

No Data Available

Interacting Proteins for TRBV25OR9-2 Gene

Gene Ontology (GO) - Biological Process for TRBV25OR9-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV25OR9-2 Gene

Drugs & Compounds for TRBV25OR9-2 Gene

No Compound Related Data Available

Transcripts for TRBV25OR9-2 Gene

mRNA/cDNA for TRBV25OR9-2 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV25OR9-2 Gene

No ASD Table

Relevant External Links for TRBV25OR9-2 Gene

GeneLoc Exon Structure for
TRBV25OR9-2
ECgene alternative splicing isoforms for
TRBV25OR9-2

Expression for TRBV25OR9-2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV25OR9-2 Gene

genes like me logo Genes that share expression patterns with TRBV25OR9-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV25OR9-2 Gene

Orthologs for TRBV25OR9-2 Gene

Evolution for TRBV25OR9-2 Gene

ENSEMBL:
Gene Tree for TRBV25OR9-2 (if available)
TreeFam:
Gene Tree for TRBV25OR9-2 (if available)

No data available for Orthologs for TRBV25OR9-2 Gene

Paralogs for TRBV25OR9-2 Gene

No data available for Paralogs for TRBV25OR9-2 Gene

Variants for TRBV25OR9-2 Gene

Relevant External Links for TRBV25OR9-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV25OR9-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV25OR9-2 Gene

Disorders for TRBV25OR9-2 Gene

Relevant External Links for TRBV25OR9-2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRBV25OR9-2

No disorders were found for TRBV25OR9-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV25OR9-2 Gene

Publications for TRBV25OR9-2 Gene

  1. Organization of human T-cell receptor beta-chain genes: clusters of V beta genes are present on chromosomes 7 and 9. (PMID: 8384723) Robinson M.A. … Concannon P. (Proc. Natl. Acad. Sci. U.S.A. 1993) 2 3 64
  2. Conserved and heterogeneous lipid antigen specificities of CD1d-restricted NKT cell receptors. (PMID: 16517731) Brigl M. … Gumperz J.E. (J. Immunol. 2006) 3 64
  3. Common intra-articular T cell expansions in patients with reactive arthritis: identical beta-chain junctional sequences and cytotoxicity toward HLA-B27. (PMID: 10201900) Dulphy N. … Toubert A. (J. Immunol. 1999) 3 64

Products for TRBV25OR9-2 Gene

Sources for TRBV25OR9-2 Gene

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