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Aliases for TRBV25-1 Gene

Aliases for TRBV25-1 Gene

  • T Cell Receptor Beta Variable 25-1 2 3
  • V_segment Translation Product 3
  • TCRBV11S1A1T 3
  • TCRBV25S1 3
  • TRBV251 3

External Ids for TRBV25-1 Gene

Previous GeneCards Identifiers for TRBV25-1 Gene

  • GC07U990185
  • GC07P141742
  • GC07P141818
  • GC07P141864
  • GC07P142058
  • GC07Pg41749
  • GC07P142381
  • GC07P142382
  • GC07P142394
  • GC07P142437
  • GC07P142483
  • GC07P142640
  • GC07P142710
  • GC07P142772
  • GC07P142819

Summaries for TRBV25-1 Gene

GeneCards Summary for TRBV25-1 Gene

TRBV25-1 (T Cell Receptor Beta Variable 25-1) is a Protein Coding gene. An important paralog of this gene is TRBV2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV25-1 Gene

Genomics for TRBV25-1 Gene

Genomic Location for TRBV25-1 Gene

Chromosome:
7
Start:
142,670,777 bp from pter
End:
142,793,368 bp from pter
Size:
122,592 bases
Orientation:
Plus strand

Genomic View for TRBV25-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for TRBV25-1 Gene

No data available for Regulatory Elements for TRBV25-1 Gene

Proteins for TRBV25-1 Gene

  • Protein details for TRBV25-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WYM9
    Recommended name:
    Protein TRBV25-1
    Protein Accession:
    A0A087WYM9

    Protein attributes for TRBV25-1 Gene

    Size:
    309 amino acids
    Molecular mass:
    34847 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV25-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WZV8
    Recommended name:
    Protein TRBV25-1
    Protein Accession:
    A0A087WZV8

    Protein attributes for TRBV25-1 Gene

    Size:
    309 amino acids
    Molecular mass:
    34974 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV25-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087X076
    Recommended name:
    Protein TRBV25-1
    Protein Accession:
    A0A087X076

    Protein attributes for TRBV25-1 Gene

    Size:
    310 amino acids
    Molecular mass:
    34962 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV25-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0G2JN66
    Recommended name:
    Protein TRBV25-1
    Protein Accession:
    A0A0G2JN66

    Protein attributes for TRBV25-1 Gene

    Size:
    309 amino acids
    Molecular mass:
    34921 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV25-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0G2JPF7
    Recommended name:
    Protein TRBV25-1
    Protein Accession:
    A0A0G2JPF7

    Protein attributes for TRBV25-1 Gene

    Size:
    310 amino acids
    Molecular mass:
    34994 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV25-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0J9YYE9
    Recommended name:
    Protein TRBV25-1
    Protein Accession:
    A0A0J9YYE9

    Protein attributes for TRBV25-1 Gene

    Size:
    177 amino acids
    Molecular mass:
    19881 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV25-1 Gene

Proteomics data for TRBV25-1 Gene at MOPED

Post-translational modifications for TRBV25-1 Gene

No Post-translational modifications

Other Protein References for TRBV25-1 Gene

No data available for DME Specific Peptides for TRBV25-1 Gene

Domains & Families for TRBV25-1 Gene

Gene Families for TRBV25-1 Gene

Protein Domains for TRBV25-1 Gene

Suggested Antigen Peptide Sequences for TRBV25-1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV25-1: view

No data available for UniProtKB/Swiss-Prot for TRBV25-1 Gene

Function for TRBV25-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV25-1 Gene

Localization for TRBV25-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV25-1 Gene

Pathways & Interactions for TRBV25-1 Gene

SuperPathways for TRBV25-1 Gene

No Data Available

Interacting Proteins for TRBV25-1 Gene

Gene Ontology (GO) - Biological Process for TRBV25-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV25-1 Gene

Drugs & Compounds for TRBV25-1 Gene

No Compound Related Data Available

Transcripts for TRBV25-1 Gene

mRNA/cDNA for TRBV25-1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV25-1 Gene

No ASD Table

Relevant External Links for TRBV25-1 Gene

GeneLoc Exon Structure for
TRBV25-1
ECgene alternative splicing isoforms for
TRBV25-1

Expression for TRBV25-1 Gene

mRNA expression in normal human tissues for TRBV25-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV25-1 Gene

This gene is overexpressed in Whole Blood (x17.9) and Brain - Nucleus accumbens (basal ganglia) (x6.9).

Protein differential expression in normal tissues from HIPED for TRBV25-1 Gene

This gene is overexpressed in Tlymphocyte (51.6), CD4 Tcells (8.8), and Peripheral blood mononuclear cells (7.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from for TRBV25-1 Gene



genes like me logo Genes that share expression patterns with TRBV25-1: view

Protein tissue co-expression partners for TRBV25-1 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for TRBV25-1 Gene

Orthologs for TRBV25-1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRBV25-1 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia TRBV25-1 36
  • 61 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia TRBV25-1 36
  • 79 (a)
OneToOne
chicken
(Gallus gallus)
Aves -- 36
  • 33 (a)
ManyToMany
-- 36
  • 38 (a)
ManyToMany
-- 36
  • 29 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 20 (a)
ManyToMany
-- 36
  • 31 (a)
ManyToMany
Species with no ortholog for TRBV25-1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV25-1 Gene

ENSEMBL:
Gene Tree for TRBV25-1 (if available)
TreeFam:
Gene Tree for TRBV25-1 (if available)

Paralogs for TRBV25-1 Gene

genes like me logo Genes that share paralogs with TRBV25-1: view

Variants for TRBV25-1 Gene

Relevant External Links for TRBV25-1 Gene

HapMap Linkage Disequilibrium report
TRBV25-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV25-1 Gene

Disorders for TRBV25-1 Gene

genes like me logo Genes that share disorders with TRBV25-1: view

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV25-1 Gene

Publications for TRBV25-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 67

Products for TRBV25-1 Gene

Sources for TRBV25-1 Gene

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