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Aliases for TRBV21OR9-2 Gene

Aliases for TRBV21OR9-2 Gene

  • T Cell Receptor Beta Variable 21/OR9-2 (Pseudogene) 2 3
  • T-Cell Receptor, Beta Variable Region 10, Orphon 2 3
  • TCRBV10O 2 3
  • T Cell Receptor Beta Variable 21/OR9-2 (Non-Functional) 3
  • T-Cell Receptor Beta Variable 21/OR9-2 (Pseudogene) 5
  • TRBV21/OR9-2 3
  • TCRBV10S2O 3
  • TCRBV21S2 3

External Ids for TRBV21OR9-2 Gene

Previous HGNC Symbols for TRBV21OR9-2 Gene

  • TCRBV10O

Previous GeneCards Identifiers for TRBV21OR9-2 Gene

  • GC09U990069
  • GC09P033619
  • GC09P033630
  • GC09P033631
  • GC09P033635
  • GC09P033707
  • GC09P033744
  • GC09P033781
  • GC09P033822
  • GC09P033833
  • GC09P033877
  • GC09P033911
  • GC09P033950
  • GC09P033986
  • GC09P034022
  • GC09P034069

Summaries for TRBV21OR9-2 Gene

GeneCards Summary for TRBV21OR9-2 Gene

TRBV21OR9-2 (T Cell Receptor Beta Variable 21/OR9-2 (Pseudogene)) is a Pseudogene. An important paralog of this gene is TRBV23-1.

Additional gene information for TRBV21OR9-2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV21OR9-2 Gene

Genomics for TRBV21OR9-2 Gene

GeneHancer (GH) Regulatory Elements for TRBV21OR9-2 Gene

Promoters and enhancers for TRBV21OR9-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I033633 Enhancer 0.2 ENCODE 0.8 +4.6 4644 1.5 TRBV22OR9-2 TRBV26OR9-2 PRSS3P4 TRBV21OR9-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV21OR9-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV21OR9-2 Gene

Genomic Locations for TRBV21OR9-2 Gene
chr9:33,629,121-33,629,588
(GRCh38/hg38)
Size:
468 bases
Orientation:
Plus strand
chr9:33,629,119-33,629,586
(GRCh37/hg19)

Genomic View for TRBV21OR9-2 Gene

Genes around TRBV21OR9-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV21OR9-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV21OR9-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV21OR9-2 Gene

Proteins for TRBV21OR9-2 Gene

  • Protein details for TRBV21OR9-2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B6F4
    Recommended name:
    T-cell receptor beta variable 21/OR9-2 (pseudogene)
    Protein Accession:
    A0A075B6F4

    Protein attributes for TRBV21OR9-2 Gene

    Size:
    123 amino acids
    Molecular mass:
    14427 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV21OR9-2 Gene

Post-translational modifications for TRBV21OR9-2 Gene

No Post-translational modifications

Other Protein References for TRBV21OR9-2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV21OR9-2 Gene

Domains & Families for TRBV21OR9-2 Gene

Gene Families for TRBV21OR9-2 Gene

Protein Domains for TRBV21OR9-2 Gene

Suggested Antigen Peptide Sequences for TRBV21OR9-2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV21OR9-2: view

No data available for UniProtKB/Swiss-Prot for TRBV21OR9-2 Gene

Function for TRBV21OR9-2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV21OR9-2 Gene

Localization for TRBV21OR9-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV21OR9-2 Gene

Pathways & Interactions for TRBV21OR9-2 Gene

SuperPathways for TRBV21OR9-2 Gene

No Data Available

Interacting Proteins for TRBV21OR9-2 Gene

Gene Ontology (GO) - Biological Process for TRBV21OR9-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV21OR9-2 Gene

Drugs & Compounds for TRBV21OR9-2 Gene

No Compound Related Data Available

Transcripts for TRBV21OR9-2 Gene

mRNA/cDNA for TRBV21OR9-2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV21OR9-2 Gene

No ASD Table

Relevant External Links for TRBV21OR9-2 Gene

GeneLoc Exon Structure for
TRBV21OR9-2
ECgene alternative splicing isoforms for
TRBV21OR9-2

Expression for TRBV21OR9-2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV21OR9-2 Gene

genes like me logo Genes that share expression patterns with TRBV21OR9-2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV21OR9-2 Gene

Orthologs for TRBV21OR9-2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV21OR9-2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 34
  • 40 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 34
  • 40 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 34 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 34 (a)
OneToMany
Species where no ortholog for TRBV21OR9-2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV21OR9-2 Gene

ENSEMBL:
Gene Tree for TRBV21OR9-2 (if available)
TreeFam:
Gene Tree for TRBV21OR9-2 (if available)

Paralogs for TRBV21OR9-2 Gene

Pseudogenes.org Pseudogenes for TRBV21OR9-2 Gene

genes like me logo Genes that share paralogs with TRBV21OR9-2: view

Variants for TRBV21OR9-2 Gene

Additional Variant Information for TRBV21OR9-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV21OR9-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV21OR9-2 Gene

Disorders for TRBV21OR9-2 Gene

No disorders were found for TRBV21OR9-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV21OR9-2 Gene

Publications for TRBV21OR9-2 Gene

  1. Organization of human T-cell receptor beta-chain genes: clusters of V beta genes are present on chromosomes 7 and 9. (PMID: 8384723) Robinson MA … Concannon P (Proceedings of the National Academy of Sciences of the United States of America 1993) 2 3 58

Products for TRBV21OR9-2 Gene

Sources for TRBV21OR9-2 Gene

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