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Aliases for TRBV21-1 Gene

Aliases for TRBV21-1 Gene

  • T-Cell Receptor Beta Variable 21-1 (Pseudogene) 2 5
  • T Cell Receptor Beta Variable 21-1 (Pseudogene) 2 3
  • T Cell Receptor Beta Variable 21-1 Pseudogene 2
  • T Cell Receptor Beta Variable 21-1 2
  • TCRBV10S1P 3
  • TCRBV21S1 3
  • TRBV211 3

External Ids for TRBV21-1 Gene

Previous GeneCards Identifiers for TRBV21-1 Gene

  • GC07U990189
  • GC07P141709
  • GC07P141787
  • GC07P141788
  • GC07P141724
  • GC07P141832
  • GC07P141912
  • GC07P142027
  • GC07P142044
  • GC07P142063
  • GC07P142078
  • GC07P142092
  • GC07P142109
  • GC07P142135
  • GC07Pg41717
  • GC07P142348
  • GC07P142358
  • GC07P142386
  • GC07P142422
  • GC07P142475
  • GC07P142634
  • GC07P142703
  • GC07P142767
  • GC07P142761
  • GC07P142872
  • GC07P143005
  • GC07P143156
  • GC07P143353
  • GC07P143503

Summaries for TRBV21-1 Gene

GeneCards Summary for TRBV21-1 Gene

TRBV21-1 (T-Cell Receptor Beta Variable 21-1 (Pseudogene)) is a Pseudogene. Diseases associated with TRBV21-1 include Angioimmunoblastic Lymphadenopathy With Dysproteinemia.

Additional gene information for TRBV21-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV21-1 Gene

Genomics for TRBV21-1 Gene

Regulatory Elements for TRBV21-1 Gene

Enhancers for TRBV21-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H142632 0.7 ENCODE 0.7 -4.2 -4215 0 CTCF ZNF654 RB1 TRIM22 REST RAD21 ZNF610 KLF16 SCRT2 ZNF143 TRBV21-1 TRBV20-1
GH07H142636 0.4 ENCODE 0.7 +0.5 538 2 ZNF146 TRBV28 EPHB6 SSBP1 TRBV21-1 TRBV22-1
GH07H142629 0.4 ENCODE 0.4 -6.9 -6863 0 JUND TRBV20-1 TRBV21-1
GH07H142627 0.4 Ensembl 0.4 -9.8 -9824 0 CTCF TRBV28 TRBV20-1 TRBV21-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV21-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV21-1 Gene

Chromosome:
7
Start:
142,636,924 bp from pter
End:
142,637,384 bp from pter
Size:
461 bases
Orientation:
Plus strand

Genomic View for TRBV21-1 Gene

Genes around TRBV21-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV21-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV21-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV21-1 Gene

Proteins for TRBV21-1 Gene

Post-translational modifications for TRBV21-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRBV21-1 Gene

Domains & Families for TRBV21-1 Gene

Gene Families for TRBV21-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV21-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV21-1 Gene

Function for TRBV21-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRBV21-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV21-1 Gene

Localization for TRBV21-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV21-1 Gene

Pathways & Interactions for TRBV21-1 Gene

SuperPathways for TRBV21-1 Gene

No Data Available

Interacting Proteins for TRBV21-1 Gene

Gene Ontology (GO) - Biological Process for TRBV21-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV21-1 Gene

Drugs & Compounds for TRBV21-1 Gene

No Compound Related Data Available

Transcripts for TRBV21-1 Gene

mRNA/cDNA for TRBV21-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRBV21-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV21-1 Gene

No ASD Table

Relevant External Links for TRBV21-1 Gene

GeneLoc Exon Structure for
TRBV21-1
ECgene alternative splicing isoforms for
TRBV21-1

Expression for TRBV21-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV21-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV21-1 Gene

This gene is overexpressed in Whole Blood (x27.0), Spleen (x6.1), and Small Intestine - Terminal Ileum (x5.7).
genes like me logo Genes that share expression patterns with TRBV21-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV21-1 Gene

Orthologs for TRBV21-1 Gene

Evolution for TRBV21-1 Gene

ENSEMBL:
Gene Tree for TRBV21-1 (if available)
TreeFam:
Gene Tree for TRBV21-1 (if available)

No data available for Orthologs for TRBV21-1 Gene

Paralogs for TRBV21-1 Gene

No data available for Paralogs for TRBV21-1 Gene

Variants for TRBV21-1 Gene

Relevant External Links for TRBV21-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV21-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV21-1 Gene

Disorders for TRBV21-1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for TRBV21-1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
angioimmunoblastic lymphadenopathy with dysproteinemia
  • angioimmunoblastic with dysproteinemia lymphadenopathy
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for TRBV21-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRBV21-1
genes like me logo Genes that share disorders with TRBV21-1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TRBV21-1 Gene

Publications for TRBV21-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 60
  2. Comprehensive analysis of the functional TCR repertoire at the single-cell level. (PMID: 18191637) Ozawa T … Muraguchi A (Biochemical and biophysical research communications 2008) 3 60
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  5. Analysis of T-cell subpopulations in T-cell non-Hodgkin's lymphoma of angioimmunoblastic lymphadenopathy with dysproteinemia type by single target gene amplification of T cell receptor- beta gene rearrangements. (PMID: 11337383) Willenbrock K … Hansmann ML (The American journal of pathology 2001) 3 60

Products for TRBV21-1 Gene

Sources for TRBV21-1 Gene

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