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Aliases for TRBV21-1 Gene

Aliases for TRBV21-1 Gene

  • T Cell Receptor Beta Variable 21-1 (Pseudogene) 2 3 5
  • T Cell Receptor Beta Variable 21-1 Pseudogene 2
  • T Cell Receptor Beta Variable 21-1 2
  • TCRBV10S1P 3
  • TCRBV21S1 3
  • TRBV211 3

External Ids for TRBV21-1 Gene

Previous GeneCards Identifiers for TRBV21-1 Gene

  • GC07U990189
  • GC07P141709
  • GC07P141787
  • GC07P141788
  • GC07P141724
  • GC07P141832
  • GC07P141912
  • GC07P142027
  • GC07P142044
  • GC07P142063
  • GC07P142078
  • GC07P142092
  • GC07P142109
  • GC07P142135
  • GC07Pg41717
  • GC07P142348
  • GC07P142358
  • GC07P142386
  • GC07P142422
  • GC07P142475
  • GC07P142634
  • GC07P142703
  • GC07P142767
  • GC07P142761
  • GC07P142872
  • GC07P143005
  • GC07P143156

Summaries for TRBV21-1 Gene

GeneCards Summary for TRBV21-1 Gene

TRBV21-1 (T Cell Receptor Beta Variable 21-1 (Pseudogene)) is a Pseudogene. Diseases associated with TRBV21-1 include Angioimmunoblastic Lymphadenopathy With Dysproteinemia.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV21-1 Gene

Genomics for TRBV21-1 Gene

Regulatory Elements for TRBV21-1 Gene

Enhancers for TRBV21-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F142636 1 Ensembl ENCODE 0.8 +0.5 538 2.0 ZNF146 TRBV28 EPHB6 SSBP1 TRBV21-1 TRBV22-1
GH07F142632 0.6 ENCODE 0.8 -4.2 -4215 0.2 CTCF ZNF654 TEAD4 TRIM22 REST RAD21 ZNF366 ZNF610 KLF16 SCRT2 TRBV21-1 TRBV20-1
GH07F142629 0.2 ENCODE 0.4 -6.9 -6863 0.2 JUND TRBV20-1 TRBV21-1
GH07F142627 0.2 Ensembl 0.4 -9.7 -9724 0.4 TRBV28 TRBV20-1 TRBV21-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRBV21-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV21-1 Gene

142,636,924 bp from pter
142,637,384 bp from pter
461 bases
Plus strand

Genomic View for TRBV21-1 Gene

Genes around TRBV21-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV21-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV21-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV21-1 Gene

Proteins for TRBV21-1 Gene

Post-translational modifications for TRBV21-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRBV21-1 Gene

Domains & Families for TRBV21-1 Gene

Gene Families for TRBV21-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV21-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV21-1 Gene

Function for TRBV21-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV21-1 Gene

Localization for TRBV21-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV21-1 Gene

Pathways & Interactions for TRBV21-1 Gene

SuperPathways for TRBV21-1 Gene

No Data Available

Interacting Proteins for TRBV21-1 Gene

Gene Ontology (GO) - Biological Process for TRBV21-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRBV21-1 Gene

Transcripts for TRBV21-1 Gene

mRNA/cDNA for TRBV21-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV21-1 Gene

No ASD Table

Relevant External Links for TRBV21-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRBV21-1 Gene

mRNA expression in normal human tissues for TRBV21-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV21-1 Gene

This gene is overexpressed in Whole Blood (x27.0), Spleen (x6.1), and Small Intestine - Terminal Ileum (x5.7).
genes like me logo Genes that share expression patterns with TRBV21-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRBV21-1 Gene

Orthologs for TRBV21-1 Gene

Evolution for TRBV21-1 Gene

Gene Tree for TRBV21-1 (if available)
Gene Tree for TRBV21-1 (if available)

No data available for Orthologs for TRBV21-1 Gene

Paralogs for TRBV21-1 Gene

No data available for Paralogs for TRBV21-1 Gene

Variants for TRBV21-1 Gene

Relevant External Links for TRBV21-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV21-1 Gene

Disorders for TRBV21-1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for TRBV21-1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
angioimmunoblastic lymphadenopathy with dysproteinemia
  • angioimmunoblastic with dysproteinemia lymphadenopathy
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for TRBV21-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with TRBV21-1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TRBV21-1 Gene

Publications for TRBV21-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 64
  2. Comprehensive analysis of the functional TCR repertoire at the single-cell level. (PMID: 18191637) Ozawa T. … Muraguchi A. (Biochem. Biophys. Res. Commun. 2008) 3 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  5. Analysis of T-cell subpopulations in T-cell non-Hodgkin's lymphoma of angioimmunoblastic lymphadenopathy with dysproteinemia type by single target gene amplification of T cell receptor- beta gene rearrangements. (PMID: 11337383) Willenbrock K. … Hansmann M.L. (Am. J. Pathol. 2001) 3 64

Products for TRBV21-1 Gene

Sources for TRBV21-1 Gene

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