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Aliases for TRBV20-1 Gene

Aliases for TRBV20-1 Gene

  • T-Cell Receptor Beta Variable 20-1 2 5
  • T Cell Receptor Beta Variable 20-1 2 3
  • V_segment Translation Product 3
  • TCRBV20S1 3
  • TCRBV2S1 3
  • TRBV201 3

External Ids for TRBV20-1 Gene

Previous GeneCards Identifiers for TRBV20-1 Gene

  • GC07U990190
  • GC07P141699
  • GC07P141776
  • GC07P141822
  • GC07P141823
  • GC07P142021
  • GC07P142028
  • GC07P142045
  • GC07P142051
  • GC07P142070
  • GC07P142087
  • GC07P142103
  • GC07P142134
  • GC07P142336
  • GC07P142340
  • GC07P142385
  • GC07P142421
  • GC07P142473
  • GC07P142633
  • GC07P142702
  • GC07P142766
  • GC07P142760
  • GC07P142871
  • GC07P143004
  • GC07P143153
  • GC07P143352

Summaries for TRBV20-1 Gene

GeneCards Summary for TRBV20-1 Gene

TRBV20-1 (T-Cell Receptor Beta Variable 20-1) is a Protein Coding gene. An important paralog of this gene is TRBV20OR9-2.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV20-1 Gene

Genomics for TRBV20-1 Gene

Regulatory Elements for TRBV20-1 Gene

Enhancers for TRBV20-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G142626 0.6 ENCODE 0.7 0.0 -38 0.2 ZNF263 CTCF PKNOX1 RB1 ZNF143 RAD21 TRBV20-1 TRBV19
GH07G142629 0.4 ENCODE 0.7 +3.4 3413 0.2 JUND TRBV20-1 TRBV21-1
GH07G142627 0.4 Ensembl 0.7 +0.5 452 0.2 CTCF TRBV28 TRBV20-1 TRBV21-1
GH07G142632 0.7 ENCODE 0.4 +6.1 6061 0.2 CTCF ZNF654 RB1 TEAD4 TRIM22 REST RAD21 ZNF366 ZNF610 KLF16 TRBV21-1 TRBV20-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV20-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV20-1 Gene

142,626,649 bp from pter
142,627,399 bp from pter
751 bases
Plus strand

Genomic View for TRBV20-1 Gene

Genes around TRBV20-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV20-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV20-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV20-1 Gene

Proteins for TRBV20-1 Gene

  • Protein details for TRBV20-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    T-cell receptor beta variable 20-1
    Protein Accession:

    Protein attributes for TRBV20-1 Gene

    111 amino acids
    Molecular mass:
    12175 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV20-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    T-cell receptor beta variable 20-1
    Protein Accession:

    Protein attributes for TRBV20-1 Gene

    111 amino acids
    Molecular mass:
    12205 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for TRBV20-1 Gene

neXtProt entry for TRBV20-1 Gene

Post-translational modifications for TRBV20-1 Gene

No Post-translational modifications

Other Protein References for TRBV20-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV20-1 Gene

Domains & Families for TRBV20-1 Gene

Gene Families for TRBV20-1 Gene

Protein Domains for TRBV20-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV20-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRBV20-1 Gene

Function for TRBV20-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV20-1 Gene

Localization for TRBV20-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV20-1 Gene

Pathways & Interactions for TRBV20-1 Gene

SuperPathways for TRBV20-1 Gene

No Data Available

Interacting Proteins for TRBV20-1 Gene

Gene Ontology (GO) - Biological Process for TRBV20-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRBV20-1 Gene

Drugs & Compounds for TRBV20-1 Gene

No Compound Related Data Available

Transcripts for TRBV20-1 Gene

mRNA/cDNA for TRBV20-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV20-1 Gene

No ASD Table

Relevant External Links for TRBV20-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRBV20-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV20-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV20-1 Gene

This gene is overexpressed in Whole Blood (x30.9) and Spleen (x5.2).
genes like me logo Genes that share expression patterns with TRBV20-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV20-1 Gene

Orthologs for TRBV20-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV20-1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia -- 35
  • 70 (a)
-- 35
  • 68 (a)
(Canis familiaris)
Mammalia -- 35
  • 59 (a)
(Monodelphis domestica)
Mammalia -- 35
  • 57 (a)
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 46 (a)
Species where no ortholog for TRBV20-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV20-1 Gene

Gene Tree for TRBV20-1 (if available)
Gene Tree for TRBV20-1 (if available)

Paralogs for TRBV20-1 Gene

Paralogs for TRBV20-1 Gene

genes like me logo Genes that share paralogs with TRBV20-1: view

Variants for TRBV20-1 Gene

Relevant External Links for TRBV20-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV20-1 Gene

Disorders for TRBV20-1 Gene

Relevant External Links for TRBV20-1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator

No disorders were found for TRBV20-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV20-1 Gene

Publications for TRBV20-1 Gene

  1. TCRBV20S1 and TCRBV3S1 gene segment polymorphisms in systemic sclerosis. (PMID: 18412309) Bredemeier M. … Xavier R.M. (J. Rheumatol. 2008) 3 46 64
  2. High frequency of the TCRBV20S1 null allele in the Sardinian population. (PMID: 17462510) Bonfigli S. … Longinotti M. (Hum. Immunol. 2007) 3 46 64
  3. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 64
  4. TCRBV20S1 polymorphism does not influence the susceptibility to type 1 diabetes and multiple sclerosis in the Sardinian population. (PMID: 21927869) Fozza C. … Longinotti M. (Immunogenetics 2012) 3 64
  5. Sequence and evolution of the human germline V lambda repertoire. (PMID: 8951372) Williams S.C. … Winter G. (J. Mol. Biol. 1996) 3 64

Products for TRBV20-1 Gene

Sources for TRBV20-1 Gene

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