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Aliases for TRBV2 Gene

Aliases for TRBV2 Gene

  • T Cell Receptor Beta Variable 2 2 3 5
  • V_segment Translation Product 3
  • TCRBV22S1A2N1T 3
  • TCRBV2S1 3

External Ids for TRBV2 Gene

Previous GeneCards Identifiers for TRBV2 Gene

  • GC07U990243
  • GC07P141331
  • GC07P141408
  • GC07P141457
  • GC07P141647
  • GC07P142156
  • GC07P142182
  • GC07P142319
  • GC07P142360
  • GC07P142402
  • GC07P142447
  • GC07P142579
  • GC07P142669
  • GC07P142737
  • GC07P142800
  • GC07P142561
  • GC07P142831
  • GC07P142984
  • GC07P143144

Summaries for TRBV2 Gene

GeneCards Summary for TRBV2 Gene

TRBV2 (T Cell Receptor Beta Variable 2) is a Protein Coding gene. An important paralog of this gene is TRBV7-9.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV2 Gene

Genomics for TRBV2 Gene

Regulatory Elements for TRBV2 Gene

Enhancers for TRBV2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F142300 0.6 Ensembl ENCODE 0.8 +0.1 134 0.7 CTCF TRBV2 TRBV3-1
GH07F142299 0.4 Ensembl 0.8 -1.4 -1424 0.2 OSR2 KLF8 TRB TRBV1 TRBV2
GH07F142303 0.4 ENCODE 0.8 +2.9 2851 0.1 CTCF RAD21 TRBV2 TRBV3-1
GH07F142307 0.4 FANTOM5 0.4 +6.7 6730 0.1 REST TRY2P TAS2R38 OR9A4 TRBV3-1 TRBV2
GH07F142308 0.2 Ensembl 0.4 +7.6 7577 0.2 TRBV3-1 TRBV2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRBV2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRBV2 Gene

Chromosome:
7
Start:
142,300,924 bp from pter
End:
142,301,432 bp from pter
Size:
509 bases
Orientation:
Plus strand

Genomic View for TRBV2 Gene

Genes around TRBV2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV2 Gene

Proteins for TRBV2 Gene

  • Protein details for TRBV2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0J9YWF9
    Recommended name:
    Protein TRBV2
    Protein Accession:
    A0A0J9YWF9

    Protein attributes for TRBV2 Gene

    Size:
    115 amino acids
    Molecular mass:
    13384 Da
    Quaternary structure:
    No Data Available
  • Protein details for TRBV2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1B0GX68
    Recommended name:
    Protein TRBV2
    Protein Accession:
    A0A1B0GX68

    Protein attributes for TRBV2 Gene

    Size:
    115 amino acids
    Molecular mass:
    13403 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV2 Gene

Post-translational modifications for TRBV2 Gene

No Post-translational modifications

Other Protein References for TRBV2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV2 Gene

Domains & Families for TRBV2 Gene

Gene Families for TRBV2 Gene

Protein Domains for TRBV2 Gene

Suggested Antigen Peptide Sequences for TRBV2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV2: view

No data available for UniProtKB/Swiss-Prot for TRBV2 Gene

Function for TRBV2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV2 Gene

Localization for TRBV2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRBV2 Gene

Pathways & Interactions for TRBV2 Gene

SuperPathways for TRBV2 Gene

No Data Available

Interacting Proteins for TRBV2 Gene

Gene Ontology (GO) - Biological Process for TRBV2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV2 Gene

Transcripts for TRBV2 Gene

mRNA/cDNA for TRBV2 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV2 Gene

No ASD Table

Relevant External Links for TRBV2 Gene

GeneLoc Exon Structure for
TRBV2
ECgene alternative splicing isoforms for
TRBV2

Expression for TRBV2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRBV2 Gene

mRNA differential expression in normal tissues according to GTEx for TRBV2 Gene

This gene is overexpressed in Whole Blood (x32.6) and Spleen (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of TRBV2 Gene:

TRBV2
genes like me logo Genes that share expression patterns with TRBV2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRBV2 Gene

Orthologs for TRBV2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRBV2 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 35 (a)
ManyToMany
-- 35
  • 33 (a)
ManyToMany
-- 35
  • 29 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 35
  • 30 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia -- 35
  • 29 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 24 (a)
OneToMany
Species where no ortholog for TRBV2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV2 Gene

ENSEMBL:
Gene Tree for TRBV2 (if available)
TreeFam:
Gene Tree for TRBV2 (if available)

Paralogs for TRBV2 Gene

Variants for TRBV2 Gene

Relevant External Links for TRBV2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV2 Gene

Disorders for TRBV2 Gene

No disorders were found for TRBV2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV2 Gene

Publications for TRBV2 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L. … Hood L. (Science 1996) 2 3 64
  2. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3 64

Products for TRBV2 Gene

Sources for TRBV2 Gene

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