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Aliases for TRBV16 Gene

Aliases for TRBV16 Gene

  • T-Cell Receptor Beta Variable 16 (Gene/Pseudogene) 2 3
  • T Cell Receptor Beta Variable 16 2 3
  • T Cell Receptor Beta Variable 16 (Gene/Pseudogene) 2
  • T-Cell Receptor Beta Chain V Region 3
  • TCRBV25S1A2PT 3
  • BV25S1J1.2 3
  • AC244472.1 5
  • TCRBV16S1 3
  • TCRBV25S1 3
  • TCRB 3

External Ids for TRBV16 Gene

Previous GeneCards Identifiers for TRBV16 Gene

  • GC07U990194
  • GC07P141670
  • GC07P141747
  • GC07P141793
  • GC07P141996
  • GC07P142024
  • GC07P142040
  • GC07P142050
  • GC07P142067
  • GC07P142086
  • GC07P142101
  • GC07P142130
  • GC07Pg41678
  • GC07P142825
  • GC07P142975
  • GC07P143127
  • GC07P143339
  • GC07P143476
  • GC07P143617

Summaries for TRBV16 Gene

GeneCards Summary for TRBV16 Gene

TRBV16 (T-Cell Receptor Beta Variable 16 (Gene/Pseudogene)) is a Pseudogene. An important paralog of this gene is TRBV23-1.

Additional gene information for TRBV16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV16 Gene

Genomics for TRBV16 Gene

Genomic Locations for TRBV16 Gene

Genomic Locations for TRBV16 Gene
chr7:142,598,016-142,598,469
(GRCh38/hg38)
Size:
454 bases
Orientation:
Plus strand
chr7:141,678,346-141,678,799
(GRCh37/hg19)

Genomic View for TRBV16 Gene

Genes around TRBV16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV16 Gene

No data available for Regulatory Elements for TRBV16 Gene

Proteins for TRBV16 Gene

  • Protein details for TRBV16 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A087WV62
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A087WV62

    Protein attributes for TRBV16 Gene

    Size:
    115 amino acids
    Molecular mass:
    12845 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV16 Gene

Post-translational modifications for TRBV16 Gene

No Post-translational modifications

Other Protein References for TRBV16 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV16 Gene

Domains & Families for TRBV16 Gene

Gene Families for TRBV16 Gene

Protein Domains for TRBV16 Gene

Suggested Antigen Peptide Sequences for TRBV16 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV16: view

No data available for UniProtKB/Swiss-Prot for TRBV16 Gene

Function for TRBV16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV16 Gene

Localization for TRBV16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV16 Gene

Pathways & Interactions for TRBV16 Gene

SuperPathways for TRBV16 Gene

No Data Available

Interacting Proteins for TRBV16 Gene

Gene Ontology (GO) - Biological Process for TRBV16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV16 Gene

Drugs & Compounds for TRBV16 Gene

No Compound Related Data Available

Transcripts for TRBV16 Gene

mRNA/cDNA for TRBV16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV16 Gene

No ASD Table

Relevant External Links for TRBV16 Gene

GeneLoc Exon Structure for
TRBV16
ECgene alternative splicing isoforms for
TRBV16

Expression for TRBV16 Gene

NURSA nuclear receptor signaling pathways regulating expression of TRBV16 Gene:

TRBV16
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV16 Gene

Orthologs for TRBV16 Gene

Evolution for TRBV16 Gene

ENSEMBL:
Gene Tree for TRBV16 (if available)
TreeFam:
Gene Tree for TRBV16 (if available)

No data available for Orthologs for TRBV16 Gene

Paralogs for TRBV16 Gene

Variants for TRBV16 Gene

Relevant External Links for TRBV16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV16 Gene

Disorders for TRBV16 Gene

Relevant External Links for TRBV16

Genetic Association Database (GAD)
TRBV16
Human Genome Epidemiology (HuGE) Navigator
TRBV16
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRBV16

No disorders were found for TRBV16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRBV16 Gene

Publications for TRBV16 Gene

  1. T-cell receptor BV gene segment polymorphisms in healthy elderly individuals from the south of Brazil. (PMID: 15086347) Peres A … Chies JA (European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics 2004) 3 45 60
  2. Genomic absence of the gene encoding T cell receptor Vbeta7.2 is linked to the presence of autoantibodies in Sjögren's syndrome. (PMID: 14730616) Manavalan SJ … Posnett DN (Arthritis and rheumatism 2004) 3 45 60
  3. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 60
  4. In angioimmunoblastic T-cell lymphoma, neoplastic T cells may be a minor cell population. A molecular single-cell and immunohistochemical study. (PMID: 15480765) Willenbrock K … Hansmann ML (Virchows Archiv : an international journal of pathology 2005) 3 60
  5. Identification of a novel human T-cell receptor V beta subfamily by genomic cloning. (PMID: 7868375) Wei S … Concannon P (Human immunology 1994) 3 60

Products for TRBV16 Gene

Sources for TRBV16 Gene

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