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Aliases for TRBV10-1 Gene

Aliases for TRBV10-1 Gene

  • T Cell Receptor Beta Variable 10-1(Gene/Pseudogene) 2 3
  • T-Cell Receptor Beta Variable 10-1(Gene/Pseudogene) 5
  • T Cell Receptor Beta Variable 10-1 3
  • V_segment Translation Product 3
  • TCRBV12S2A1T 3
  • TCRBV10S1 3
  • TCRBV12S2 3
  • TRBV101 3

External Ids for TRBV10-1 Gene

Previous GeneCards Identifiers for TRBV10-1 Gene

  • GC07U990208
  • GC07P141452
  • GC07P141529
  • GC07P141575
  • GC07P141769
  • GC07P141770
  • GC07P141799
  • GC07P141817
  • GC07P141857
  • GC07P142116
  • GC07Pg41460
  • GC07M142234
  • GC07M142258
  • GC07M142284
  • GC07M142307
  • GC07P142628
  • GC07P142945
  • GC07P143087
  • GC07P143240
  • GC07P143441
  • GC07P143587
  • GC07P143729

Summaries for TRBV10-1 Gene

GeneCards Summary for TRBV10-1 Gene

TRBV10-1 (T Cell Receptor Beta Variable 10-1(Gene/Pseudogene)) is a Protein Coding gene. An important paralog of this gene is TRBV10-3.

Additional gene information for TRBV10-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRBV10-1 Gene

Genomics for TRBV10-1 Gene

GeneHancer (GH) Regulatory Elements for TRBV10-1 Gene

Promoters and enhancers for TRBV10-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I142336 Enhancer 0.2 dbSUPER 4.7 -62.5 -62466 1.3 LOC105375539 TRBV10-1 TRBV4-2 TRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRBV10-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRBV10-1 Gene

Genomic Locations for TRBV10-1 Gene
chr7:142,399,860-142,400,377
(GRCh38/hg38)
Size:
518 bases
Orientation:
Plus strand
chr7:142,231,573-142,232,090
(GRCh37/hg19)

Genomic View for TRBV10-1 Gene

Genes around TRBV10-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRBV10-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRBV10-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRBV10-1 Gene

Proteins for TRBV10-1 Gene

  • Protein details for TRBV10-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0K0K1A3
    Recommended name:
    T-cell receptor beta variable 10-1(gene/pseudogene)
    Protein Accession:
    A0A0K0K1A3
    Secondary Accessions:
    • A0A075B6L8
    • A0A0A6YYU3
    • A0A543

    Protein attributes for TRBV10-1 Gene

    Size:
    114 amino acids
    Molecular mass:
    12970 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRBV10-1 Gene

Post-translational modifications for TRBV10-1 Gene

No Post-translational modifications

Other Protein References for TRBV10-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRBV10-1 Gene

Domains & Families for TRBV10-1 Gene

Gene Families for TRBV10-1 Gene

Protein Domains for TRBV10-1 Gene

Suggested Antigen Peptide Sequences for TRBV10-1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRBV10-1: view

No data available for UniProtKB/Swiss-Prot for TRBV10-1 Gene

Function for TRBV10-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRBV10-1 Gene

Localization for TRBV10-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRBV10-1 Gene

Pathways & Interactions for TRBV10-1 Gene

SuperPathways for TRBV10-1 Gene

No Data Available

Interacting Proteins for TRBV10-1 Gene

Gene Ontology (GO) - Biological Process for TRBV10-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRBV10-1 Gene

Drugs & Compounds for TRBV10-1 Gene

No Compound Related Data Available

Transcripts for TRBV10-1 Gene

mRNA/cDNA for TRBV10-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRBV10-1 Gene

No ASD Table

Relevant External Links for TRBV10-1 Gene

GeneLoc Exon Structure for
TRBV10-1
ECgene alternative splicing isoforms for
TRBV10-1

Expression for TRBV10-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRBV10-1 Gene

genes like me logo Genes that share expression patterns with TRBV10-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRBV10-1 Gene

Orthologs for TRBV10-1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRBV10-1 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 51 (a)
ManyToMany
-- 34
  • 37 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 34
  • 49 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 34 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 34
  • 35 (a)
ManyToMany
-- 34
  • 31 (a)
ManyToMany
-- 34
  • 27 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 34 (a)
ManyToMany
-- 34
  • 24 (a)
ManyToMany
Species where no ortholog for TRBV10-1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRBV10-1 Gene

ENSEMBL:
Gene Tree for TRBV10-1 (if available)
TreeFam:
Gene Tree for TRBV10-1 (if available)

Paralogs for TRBV10-1 Gene

genes like me logo Genes that share paralogs with TRBV10-1: view

Variants for TRBV10-1 Gene

Additional Variant Information for TRBV10-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRBV10-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRBV10-1 Gene

Disorders for TRBV10-1 Gene

No disorders were found for TRBV10-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRBV10-1 Gene

Publications for TRBV10-1 Gene

  1. The complete 685-kilobase DNA sequence of the human beta T cell receptor locus. (PMID: 8650574) Rowen L … Hood L (Science (New York, N.Y.) 1996) 2 3 58

Products for TRBV10-1 Gene

Sources for TRBV10-1 Gene

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