Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRAV8-5 Gene

Aliases for TRAV8-5 Gene

  • T Cell Receptor Alpha Variable 8-5 (Pseudogene) 2 3 5
  • T Cell Receptor Alpha Variable 8-5 Pseudogene 2 3
  • T Cell Receptor Alpha Variable 8-5 2
  • TCRAV8S5 3
  • TRAV85 3

External Ids for TRAV8-5 Gene

Previous GeneCards Identifiers for TRAV8-5 Gene

  • GC14U990318
  • GC14P020361
  • GC14P021441
  • GC14P022371
  • GC14P002489

Summaries for TRAV8-5 Gene

GeneCards Summary for TRAV8-5 Gene

TRAV8-5 (T Cell Receptor Alpha Variable 8-5 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV8-5 Gene

Genomics for TRAV8-5 Gene

Regulatory Elements for TRAV8-5 Gene

Promoters for TRAV8-5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TRAV8-5 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRAV8-5 Gene

Chromosome:
14
Start:
21,903,077 bp from pter
End:
21,904,598 bp from pter
Size:
1,522 bases
Orientation:
Plus strand

Genomic View for TRAV8-5 Gene

Genes around TRAV8-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRAV8-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRAV8-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV8-5 Gene

Proteins for TRAV8-5 Gene

Post-translational modifications for TRAV8-5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRAV8-5 Gene

Domains & Families for TRAV8-5 Gene

Gene Families for TRAV8-5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV8-5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAV8-5 Gene

Function for TRAV8-5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRAV8-5 Gene

Localization for TRAV8-5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV8-5 Gene

Pathways & Interactions for TRAV8-5 Gene

SuperPathways for TRAV8-5 Gene

No Data Available

Interacting Proteins for TRAV8-5 Gene

Gene Ontology (GO) - Biological Process for TRAV8-5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRAV8-5 Gene

Drugs & Compounds for TRAV8-5 Gene

No Compound Related Data Available

Transcripts for TRAV8-5 Gene

mRNA/cDNA for TRAV8-5 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV8-5 Gene

No ASD Table

Relevant External Links for TRAV8-5 Gene

GeneLoc Exon Structure for
TRAV8-5
ECgene alternative splicing isoforms for
TRAV8-5

Expression for TRAV8-5 Gene

mRNA expression in normal human tissues for TRAV8-5 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV8-5 Gene

This gene is overexpressed in Nerve - Tibial (x11.0), Brain - Spinal cord (cervical c-1) (x7.8), Whole Blood (x5.4), and Colon - Sigmoid (x5.2).
genes like me logo Genes that share expression patterns with TRAV8-5: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRAV8-5 Gene

Orthologs for TRAV8-5 Gene

Evolution for TRAV8-5 Gene

ENSEMBL:
Gene Tree for TRAV8-5 (if available)
TreeFam:
Gene Tree for TRAV8-5 (if available)

No data available for Orthologs for TRAV8-5 Gene

Paralogs for TRAV8-5 Gene

No data available for Paralogs for TRAV8-5 Gene

Variants for TRAV8-5 Gene

Relevant External Links for TRAV8-5 Gene

HapMap Linkage Disequilibrium report
TRAV8-5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRAV8-5 Gene

Disorders for TRAV8-5 Gene

Relevant External Links for TRAV8-5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRAV8-5

No disorders were found for TRAV8-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRAV8-5 Gene

Publications for TRAV8-5 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3 67
  2. Comprehensive analysis of the functional TCR repertoire at the single-cell level. (PMID: 18191637) Ozawa T. … Muraguchi A. (Biochem. Biophys. Res. Commun. 2008) 3

Products for TRAV8-5 Gene

Sources for TRAV8-5 Gene

Back to Top

Content