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Aliases for TRAV4 Gene

Aliases for TRAV4 Gene

  • T Cell Receptor Alpha Variable 4 2 3
  • TCRAV20S1 3
  • TCRAV4S1 3

External Ids for TRAV4 Gene

Previous GeneCards Identifiers for TRAV4 Gene

  • GC14U990325
  • GC14P020195
  • GC14P020196
  • GC14P021274
  • GC14P022205

Summaries for TRAV4 Gene

GeneCards Summary for TRAV4 Gene

TRAV4 (T Cell Receptor Alpha Variable 4) is a Protein Coding gene. An important paralog of this gene is TRAV26-2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV4 Gene

Genomics for TRAV4 Gene

Genomic Location for TRAV4 Gene

Chromosome:
14
Start:
21,736,152 bp from pter
End:
21,736,982 bp from pter
Size:
831 bases
Orientation:
Plus strand

Genomic View for TRAV4 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for TRAV4 Gene

No data available for Regulatory Elements for TRAV4 Gene

Proteins for TRAV4 Gene

  • Protein details for TRAV4 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0B4J268
    Recommended name:
    Protein TRAV4
    Protein Accession:
    A0A0B4J268

    Protein attributes for TRAV4 Gene

    Size:
    109 amino acids
    Molecular mass:
    12215 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV4 Gene

Proteomics data for TRAV4 Gene at MOPED

Post-translational modifications for TRAV4 Gene

No Post-translational modifications

Other Protein References for TRAV4 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV4 Gene

Domains & Families for TRAV4 Gene

Gene Families for TRAV4 Gene

Protein Domains for TRAV4 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV4: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAV4 Gene

Function for TRAV4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRAV4 Gene

Localization for TRAV4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV4 Gene

Pathways & Interactions for TRAV4 Gene

SuperPathways for TRAV4 Gene

No Data Available

Interacting Proteins for TRAV4 Gene

Gene Ontology (GO) - Biological Process for TRAV4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRAV4 Gene

Drugs & Compounds for TRAV4 Gene

No Compound Related Data Available

Transcripts for TRAV4 Gene

mRNA/cDNA for TRAV4 Gene

(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV4 Gene

No ASD Table

Relevant External Links for TRAV4 Gene

GeneLoc Exon Structure for
TRAV4
ECgene alternative splicing isoforms for
TRAV4

Expression for TRAV4 Gene

mRNA expression in normal human tissues for TRAV4 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV4 Gene

This gene is overexpressed in Whole Blood (x23.9), Small Intestine - Terminal Ileum (x7.1), and Spleen (x5.7).
genes like me logo Genes that share expression patterns with TRAV4: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRAV4 Gene

Orthologs for TRAV4 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRAV4 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 55 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 38 (a)
OneToMany
Species with no ortholog for TRAV4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV4 Gene

ENSEMBL:
Gene Tree for TRAV4 (if available)
TreeFam:
Gene Tree for TRAV4 (if available)

Paralogs for TRAV4 Gene

Paralogs for TRAV4 Gene

genes like me logo Genes that share paralogs with TRAV4: view

Variants for TRAV4 Gene

Relevant External Links for TRAV4 Gene

HapMap Linkage Disequilibrium report
TRAV4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRAV4 Gene

Disorders for TRAV4 Gene

genes like me logo Genes that share disorders with TRAV4: view

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRAV4 Gene

Publications for TRAV4 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 67
  2. Role of TRAV locus in low caries experience. (PMID: 23657505) BriseA+o-Ruiz J. … Vieira A.R. (Hum. Genet. 2013) 67

Products for TRAV4 Gene

Sources for TRAV4 Gene

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