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Aliases for TRAV29DV5 Gene

Aliases for TRAV29DV5 Gene

  • T Cell Receptor Alpha Variable 29/Delta Variable 5 (Gene/Pseudogene) 2 3
  • T Cell Receptor Alpha Variable 29/Delta Variable 5 2
  • T Cell Receptor Alpha/Delta Variable 29/DV5 3
  • TRAV29/DV5 3
  • TCRAV21S1 3
  • HADV29S1 3

External Ids for TRAV29DV5 Gene

Previous GeneCards Identifiers for TRAV29DV5 Gene

  • GC14U990290
  • GC14P020622
  • GC14P020623
  • GC14P021701
  • GC14P022633
  • GC14P022651
  • GC14P022738
  • GC14P022844

Summaries for TRAV29DV5 Gene

GeneCards Summary for TRAV29DV5 Gene

TRAV29DV5 (T Cell Receptor Alpha Variable 29/Delta Variable 5 (Gene/Pseudogene)) is a Protein Coding gene. An important paralog of this gene is TRAV30.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV29DV5 Gene

Genomics for TRAV29DV5 Gene

Genomic Location for TRAV29DV5 Gene

Start:
22,163,238 bp from pter
End:
22,163,870 bp from pter
Size:
633 bases
Orientation:
Plus strand

Genomic View for TRAV29DV5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRAV29DV5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV29DV5 Gene

No data available for Regulatory Elements for TRAV29DV5 Gene

Proteins for TRAV29DV5 Gene

  • Protein details for TRAV29DV5 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0JD25
    Recommended name:
    HADV29S1
    Protein Accession:
    A0JD25
    Secondary Accessions:

    Protein attributes for TRAV29DV5 Gene

    Size:
    119 amino acids
    Molecular mass:
    13438 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV29DV5 Gene

Proteomics data for TRAV29DV5 Gene at MOPED

Post-translational modifications for TRAV29DV5 Gene

No Post-translational modifications

Other Protein References for TRAV29DV5 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV29DV5 Gene

Domains for TRAV29DV5 Gene

Gene Families for TRAV29DV5 Gene

HGNC:
  • TRAS :T cell receptors / TRA locus

Protein Domains for TRAV29DV5 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV29DV5: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAV29DV5 Gene

Function for TRAV29DV5 Gene

Gene Ontology (GO) - Molecular Function for TRAV29DV5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRAV29DV5: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRAV29DV5 Gene

Localization for TRAV29DV5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV29DV5 Gene

Pathways for TRAV29DV5 Gene

SuperPathways for TRAV29DV5 Gene

No Data Available

Interacting Proteins for TRAV29DV5 Gene

Gene Ontology (GO) - Biological Process for TRAV29DV5 Gene

None

No data available for Pathways by source for TRAV29DV5 Gene

Transcripts for TRAV29DV5 Gene

mRNA/cDNA for TRAV29DV5 Gene

(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV29DV5 Gene

No ASD Table

Relevant External Links for TRAV29DV5 Gene

GeneLoc Exon Structure for
TRAV29DV5
ECgene alternative splicing isoforms for
TRAV29DV5

Expression for TRAV29DV5 Gene

mRNA expression in normal human tissues for TRAV29DV5 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV29DV5 Gene

This gene is overexpressed in Whole Blood (30.9), Spleen (4.9), and Small Intestine - Terminal Ileum (4.1).
genes like me logo Genes that share expressions with TRAV29DV5: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TRAV29DV5 Gene

Orthologs for TRAV29DV5 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRAV29DV5 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia TRAV29DV5 36
  • 73 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TRAV29DV5 36
  • 63 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Trav19 36
  • 68 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 48 (a)
ManyToMany
-- 36
  • 38 (a)
ManyToMany
-- 36
  • 42 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 36 (a)
OneToMany
Species with no ortholog for TRAV29DV5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV29DV5 Gene

ENSEMBL:
Gene Tree for TRAV29DV5 (if available)
TreeFam:
Gene Tree for TRAV29DV5 (if available)

Paralogs for TRAV29DV5 Gene

genes like me logo Genes that share paralogs with TRAV29DV5: view

Variants for TRAV29DV5 Gene

Relevant External Links for TRAV29DV5 Gene

HapMap Linkage Disequilibrium report
TRAV29DV5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRAV29DV5 Gene

Disorders for TRAV29DV5 Gene

No disorders were found for TRAV29DV5 Gene.

No data available for UniProtKB/Swiss-Prot for TRAV29DV5 Gene

Publications for TRAV29DV5 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3

Products for TRAV29DV5 Gene

Sources for TRAV29DV5 Gene

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