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Aliases for TRAV25 Gene

Aliases for TRAV25 Gene

  • T Cell Receptor Alpha Variable 25 2 3
  • TCRAV25S1 3
  • TCRAV32S1 3

External Ids for TRAV25 Gene

Previous GeneCards Identifiers for TRAV25 Gene

  • GC14U990295
  • GC14P020570
  • GC14P021650
  • GC14P022584
  • GC14P022613
  • GC14P022734
  • GC14P022832

Summaries for TRAV25 Gene

GeneCards Summary for TRAV25 Gene

TRAV25 (T Cell Receptor Alpha Variable 25) is a Protein Coding gene. An important paralog of this gene is TRAV30.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV25 Gene

Genomics for TRAV25 Gene

Genomic Location for TRAV25 Gene

Start:
22,112,347 bp from pter
End:
22,113,031 bp from pter
Size:
685 bases
Orientation:
Plus strand

Genomic View for TRAV25 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRAV25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV25 Gene

No data available for Regulatory Elements for TRAV25 Gene

Proteins for TRAV25 Gene

  • Protein details for TRAV25 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0B4J276
    Recommended name:
    Protein TRAV25
    Protein Accession:
    A0A0B4J276
    Secondary Accessions:

    Protein attributes for TRAV25 Gene

    Size:
    109 amino acids
    Molecular mass:
    12388 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV25 Gene

Proteomics data for TRAV25 Gene at MOPED

Post-translational modifications for TRAV25 Gene

No Post-translational modifications

Other Protein References for TRAV25 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV25 Gene

Domains for TRAV25 Gene

Gene Families for TRAV25 Gene

HGNC:
  • TRAS :T cell receptors / TRA locus

Protein Domains for TRAV25 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV25: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAV25 Gene

Function for TRAV25 Gene

Gene Ontology (GO) - Molecular Function for TRAV25 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRAV25: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRAV25 Gene

Localization for TRAV25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV25 Gene

Pathways for TRAV25 Gene

SuperPathways for TRAV25 Gene

No Data Available

Interacting Proteins for TRAV25 Gene

Gene Ontology (GO) - Biological Process for TRAV25 Gene

None

No data available for Pathways by source for TRAV25 Gene

Transcripts for TRAV25 Gene

mRNA/cDNA for TRAV25 Gene

(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV25 Gene

No ASD Table

Relevant External Links for TRAV25 Gene

GeneLoc Exon Structure for
TRAV25
ECgene alternative splicing isoforms for
TRAV25

Expression for TRAV25 Gene

mRNA expression in normal human tissues for TRAV25 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV25 Gene

This gene is overexpressed in Whole Blood (33.0), Spleen (4.3), and Small Intestine - Terminal Ileum (4.1).
genes like me logo Genes that share expressions with TRAV25: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TRAV25 Gene

Orthologs for TRAV25 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRAV25 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 50 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 45 (a)
OneToMany
Species with no ortholog for TRAV25:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV25 Gene

ENSEMBL:
Gene Tree for TRAV25 (if available)
TreeFam:
Gene Tree for TRAV25 (if available)

Paralogs for TRAV25 Gene

genes like me logo Genes that share paralogs with TRAV25: view

Variants for TRAV25 Gene

Relevant External Links for TRAV25 Gene

HapMap Linkage Disequilibrium report
TRAV25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRAV25 Gene

Disorders for TRAV25 Gene

No disorders were found for TRAV25 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TRAV25 Gene

Publications for TRAV25 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3

Products for TRAV25 Gene

Sources for TRAV25 Gene

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