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Aliases for TRAV23DV6 Gene

Aliases for TRAV23DV6 Gene

  • T Cell Receptor Alpha Variable 23/Delta Variable 6 2 3 5
  • T Cell Receptor Alpha/Delta Variable 23/DV6 3
  • TRAV23/DV6 3
  • TCRAV17S1 3
  • HADV23S1 3

External Ids for TRAV23DV6 Gene

Previous GeneCards Identifiers for TRAV23DV6 Gene

  • GC14U990297
  • GC14P020544
  • GC14P021624
  • GC14P022555
  • GC14P022561
  • GC14P022599
  • GC14P022720
  • GC14P022826

Summaries for TRAV23DV6 Gene

GeneCards Summary for TRAV23DV6 Gene

TRAV23DV6 (T Cell Receptor Alpha Variable 23/Delta Variable 6) is a Protein Coding gene. An important paralog of this gene is TRAV30.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV23DV6 Gene

Genomics for TRAV23DV6 Gene

Regulatory Elements for TRAV23DV6 Gene

Enhancers for TRAV23DV6 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRAV23DV6 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRAV23DV6 Gene

Chromosome:
14
Start:
22,086,407 bp from pter
End:
22,086,961 bp from pter
Size:
555 bases
Orientation:
Plus strand

Genomic View for TRAV23DV6 Gene

Genes around TRAV23DV6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRAV23DV6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRAV23DV6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV23DV6 Gene

Proteins for TRAV23DV6 Gene

  • Protein details for TRAV23DV6 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B6W5
    Recommended name:
    Protein TRAV23DV6
    Protein Accession:
    A0A075B6W5

    Protein attributes for TRAV23DV6 Gene

    Size:
    121 amino acids
    Molecular mass:
    13545 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV23DV6 Gene

Proteomics data for TRAV23DV6 Gene at MOPED

Post-translational modifications for TRAV23DV6 Gene

No Post-translational modifications

Other Protein References for TRAV23DV6 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV23DV6 Gene

Domains & Families for TRAV23DV6 Gene

Gene Families for TRAV23DV6 Gene

Protein Domains for TRAV23DV6 Gene

Suggested Antigen Peptide Sequences for TRAV23DV6 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV23DV6: view

No data available for UniProtKB/Swiss-Prot for TRAV23DV6 Gene

Function for TRAV23DV6 Gene

miRNA for TRAV23DV6 Gene

miRTarBase miRNAs that target TRAV23DV6

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for TRAV23DV6 Gene

Localization for TRAV23DV6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV23DV6 Gene

Pathways & Interactions for TRAV23DV6 Gene

SuperPathways for TRAV23DV6 Gene

No Data Available

Interacting Proteins for TRAV23DV6 Gene

Gene Ontology (GO) - Biological Process for TRAV23DV6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRAV23DV6 Gene

Drugs & Compounds for TRAV23DV6 Gene

No Compound Related Data Available

Transcripts for TRAV23DV6 Gene

mRNA/cDNA for TRAV23DV6 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV23DV6 Gene

No ASD Table

Relevant External Links for TRAV23DV6 Gene

GeneLoc Exon Structure for
TRAV23DV6
ECgene alternative splicing isoforms for
TRAV23DV6

Expression for TRAV23DV6 Gene

mRNA expression in normal human tissues for TRAV23DV6 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV23DV6 Gene

This gene is overexpressed in Whole Blood (x35.1), Spleen (x4.3), and Small Intestine - Terminal Ileum (x4.0).
genes like me logo Genes that share expression patterns with TRAV23DV6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRAV23DV6 Gene

Orthologs for TRAV23DV6 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRAV23DV6 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 69 (a)
OneToMany
-- 36
  • 61 (a)
OneToMany
-- 36
  • 74 (a)
OneToMany
-- 36
  • 74 (a)
OneToMany
-- 36
  • 73 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 51 (a)
ManyToMany
-- 36
  • 47 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Trav14-2 36
  • 72 (a)
OneToMany
Trav14-3 36
  • 73 (a)
OneToMany
Trav14d-1 36
  • 69 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 38 (a)
OneToMany
Species with no ortholog for TRAV23DV6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV23DV6 Gene

ENSEMBL:
Gene Tree for TRAV23DV6 (if available)
TreeFam:
Gene Tree for TRAV23DV6 (if available)

Paralogs for TRAV23DV6 Gene

genes like me logo Genes that share paralogs with TRAV23DV6: view

Variants for TRAV23DV6 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRAV23DV6 Gene

Disorders for TRAV23DV6 Gene

No disorders were found for TRAV23DV6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRAV23DV6 Gene

Publications for TRAV23DV6 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3 67

Products for TRAV23DV6 Gene

Sources for TRAV23DV6 Gene

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