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Aliases for TRAV21 Gene

Aliases for TRAV21 Gene

  • T Cell Receptor Alpha Variable 21 2 3
  • TCRAV21S1 3
  • TCRAV23S1 3

External Ids for TRAV21 Gene

Previous GeneCards Identifiers for TRAV21 Gene

  • GC14U990299
  • GC14P020510
  • GC14P021590
  • GC14P022523
  • GC14P022527
  • GC14P022597
  • GC14P022716
  • GC14P022824

Summaries for TRAV21 Gene

GeneCards Summary for TRAV21 Gene

TRAV21 (T Cell Receptor Alpha Variable 21) is a Protein Coding gene. An important paralog of this gene is TRAV30.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV21 Gene

Genomics for TRAV21 Gene

Genomic Location for TRAV21 Gene

Start:
22,052,514 bp from pter
End:
22,053,056 bp from pter
Size:
543 bases
Orientation:
Plus strand

Genomic View for TRAV21 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRAV21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV21 Gene

No data available for Regulatory Elements for TRAV21 Gene

Proteins for TRAV21 Gene

  • Protein details for TRAV21 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0B4J279
    Recommended name:
    Protein TRAV21
    Protein Accession:
    A0A0B4J279
    Secondary Accessions:

    Protein attributes for TRAV21 Gene

    Size:
    112 amino acids
    Molecular mass:
    12289 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV21 Gene

Proteomics data for TRAV21 Gene at MOPED

Post-translational modifications for TRAV21 Gene

No Post-translational modifications

Other Protein References for TRAV21 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV21 Gene

Domains for TRAV21 Gene

Gene Families for TRAV21 Gene

HGNC:
  • TRAS :T cell receptors / TRA locus

Protein Domains for TRAV21 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV21: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAV21 Gene

Function for TRAV21 Gene

Gene Ontology (GO) - Molecular Function for TRAV21 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRAV21: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRAV21 Gene

Localization for TRAV21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV21 Gene

Pathways for TRAV21 Gene

SuperPathways for TRAV21 Gene

No Data Available

Interacting Proteins for TRAV21 Gene

Gene Ontology (GO) - Biological Process for TRAV21 Gene

None

No data available for Pathways by source for TRAV21 Gene

Transcripts for TRAV21 Gene

mRNA/cDNA for TRAV21 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV21 Gene

No ASD Table

Relevant External Links for TRAV21 Gene

GeneLoc Exon Structure for
TRAV21
ECgene alternative splicing isoforms for
TRAV21

Expression for TRAV21 Gene

mRNA expression in normal human tissues for TRAV21 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV21 Gene

This gene is overexpressed in Whole Blood (28.5) and Spleen (5.1).
genes like me logo Genes that share expressions with TRAV21: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TRAV21 Gene

Orthologs for TRAV21 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRAV21 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 39 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia TRAV21 36
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Trav4-4-dv10 36
  • 40 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 53 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 43 (a)
OneToMany
Species with no ortholog for TRAV21:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV21 Gene

ENSEMBL:
Gene Tree for TRAV21 (if available)
TreeFam:
Gene Tree for TRAV21 (if available)

Paralogs for TRAV21 Gene

Pseudogenes.org Pseudogenes for TRAV21 Gene

genes like me logo Genes that share paralogs with TRAV21: view

Variants for TRAV21 Gene

Relevant External Links for TRAV21 Gene

HapMap Linkage Disequilibrium report
TRAV21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRAV21 Gene

Disorders for TRAV21 Gene

No disorders were found for TRAV21 Gene.

No data available for UniProtKB/Swiss-Prot for TRAV21 Gene

Publications for TRAV21 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3

Products for TRAV21 Gene

Sources for TRAV21 Gene

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