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Aliases for TRAV18 Gene

Aliases for TRAV18 Gene

  • T Cell Receptor Alpha Variable 18 2 3
  • TCRAV18S1 3

External Ids for TRAV18 Gene

Summaries for TRAV18 Gene

GeneCards Summary for TRAV18 Gene

TRAV18 (T Cell Receptor Alpha Variable 18) is a Protein Coding gene. An important paralog of this gene is TRAV8-7.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV18 Gene

Genomics for TRAV18 Gene

Genomic Location for TRAV18 Gene

Start:
22,003,106 bp from pter
End:
22,003,673 bp from pter
Size:
568 bases
Orientation:
Plus strand

Genomic View for TRAV18 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRAV18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV18 Gene

No data available for Regulatory Elements for TRAV18 Gene

Proteins for TRAV18 Gene

  • Protein details for TRAV18 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B6X5-A0A075B6X5
    Recommended name:
    Protein TRAV18
    Protein Accession:
    A0A075B6X5
    Secondary Accessions:

    Protein attributes for TRAV18 Gene

    Size:
    111 amino acids
    Molecular mass:
    12414 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV18 Gene

Proteomics data for TRAV18 Gene at MOPED

Post-translational modifications for TRAV18 Gene

No Post-translational modifications

Other Protein References for TRAV18 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV18 Gene

Domains for TRAV18 Gene

Gene Families for TRAV18 Gene

HGNC:
  • TRAS :T cell receptors / TRA locus

Protein Domains for TRAV18 Gene

genes like me logo Genes that share domains with TRAV18: view

No data available for UniProtKB/Swiss-Prot for TRAV18 Gene

Function for TRAV18 Gene

Gene Ontology (GO) - Molecular Function for TRAV18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRAV18: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRAV18 Gene

Localization for TRAV18 Gene

No data available for Gene Ontology (GO) - Cellular Components for TRAV18 Gene

Pathways for TRAV18 Gene

SuperPathways for TRAV18 Gene

No Data Available

Interacting Proteins for TRAV18 Gene

Gene Ontology (GO) - Biological Process for TRAV18 Gene

None

No data available for Pathways by source for TRAV18 Gene

Transcripts for TRAV18 Gene

mRNA/cDNA for TRAV18 Gene

(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV18 Gene

No ASD Table

Relevant External Links for TRAV18 Gene

GeneLoc Exon Structure for
TRAV18
ECgene alternative splicing isoforms for
TRAV18

Expression for TRAV18 Gene

mRNA expression in normal human tissues for TRAV18 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV18 Gene

This gene is overexpressed in Whole Blood (9.2), Esophagus - Gastroesophageal Junction (6.0), and Small Intestine - Terminal Ileum (5.4).
genes like me logo Genes that share expressions with TRAV18: view

Orthologs for TRAV18 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRAV18 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia TRAV18 37
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Trav12-2 37
  • 61 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 53 (a)
ManyToMany
-- 37
  • 55 (a)
ManyToMany
-- 37
  • 50 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 38 (a)
ManyToMany
-- 37
  • 34 (a)
ManyToMany
-- 37
  • 34 (a)
ManyToMany
-- 37
  • 44 (a)
ManyToMany
-- 37
  • 40 (a)
ManyToMany
-- 37
  • 48 (a)
ManyToMany
-- 37
  • 47 (a)
ManyToMany
-- 37
  • 45 (a)
ManyToMany
-- 37
  • 32 (a)
ManyToMany
-- 37
  • 45 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 37 (a)
ManyToMany
-- 37
  • 41 (a)
ManyToMany
-- 37
  • 31 (a)
ManyToMany
-- 37
  • 34 (a)
ManyToMany
Species with no ortholog for TRAV18:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV18 Gene

ENSEMBL:
Gene Tree for TRAV18 (if available)
TreeFam:
Gene Tree for TRAV18 (if available)

Paralogs for TRAV18 Gene

genes like me logo Genes that share paralogs with TRAV18: view

Variants for TRAV18 Gene

Relevant External Links for TRAV18 Gene

HapMap Linkage Disequilibrium report
TRAV18

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRAV18 Gene

Disorders for TRAV18 Gene

No disorders were found for TRAV18 Gene.

No data available for UniProtKB/Swiss-Prot for TRAV18 Gene

Publications for TRAV18 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3

Products for TRAV18 Gene

Sources for TRAV18 Gene

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