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Aliases for TRAV13-1 Gene

Aliases for TRAV13-1 Gene

  • T Cell Receptor Alpha Variable 13-1 2 3 5
  • TCRAV13S1 3
  • TCRAV8S1 3
  • TRAV131 3

External Ids for TRAV13-1 Gene

Previous GeneCards Identifiers for TRAV13-1 Gene

  • GC14U990308
  • GC14P020327
  • GC14P021406
  • GC14P022338

Summaries for TRAV13-1 Gene

GeneCards Summary for TRAV13-1 Gene

TRAV13-1 (T Cell Receptor Alpha Variable 13-1) is a Protein Coding gene. An important paralog of this gene is TRAV30.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRAV13-1 Gene

Genomics for TRAV13-1 Gene

Genomic Location for TRAV13-1 Gene

21,868,839 bp from pter
21,869,365 bp from pter
527 bases
Plus strand

Genomic View for TRAV13-1 Gene

Genes around TRAV13-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRAV13-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRAV13-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRAV13-1 Gene

No data available for Regulatory Elements for TRAV13-1 Gene

Proteins for TRAV13-1 Gene

  • Protein details for TRAV13-1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Protein TRAV13-1
    Protein Accession:

    Protein attributes for TRAV13-1 Gene

    112 amino acids
    Molecular mass:
    12580 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRAV13-1 Gene

Proteomics data for TRAV13-1 Gene at MOPED

Post-translational modifications for TRAV13-1 Gene

No Post-translational modifications

Other Protein References for TRAV13-1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRAV13-1 Gene

Domains & Families for TRAV13-1 Gene

Gene Families for TRAV13-1 Gene

Protein Domains for TRAV13-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRAV13-1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRAV13-1 Gene

Function for TRAV13-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRAV13-1 Gene

Localization for TRAV13-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRAV13-1 Gene

Pathways & Interactions for TRAV13-1 Gene

SuperPathways for TRAV13-1 Gene

No Data Available

Interacting Proteins for TRAV13-1 Gene

Gene Ontology (GO) - Biological Process for TRAV13-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRAV13-1 Gene

Drugs & Compounds for TRAV13-1 Gene

No Compound Related Data Available

Transcripts for TRAV13-1 Gene

mRNA/cDNA for TRAV13-1 Gene

(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRAV13-1 Gene

No ASD Table

Relevant External Links for TRAV13-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRAV13-1 Gene

mRNA expression in normal human tissues for TRAV13-1 Gene

mRNA differential expression in normal tissues according to GTEx for TRAV13-1 Gene

This gene is overexpressed in Whole Blood (x31.6), Spleen (x4.6), and Small Intestine - Terminal Ileum (x4.2).
genes like me logo Genes that share expression patterns with TRAV13-1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRAV13-1 Gene

Orthologs for TRAV13-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRAV13-1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia -- 36
  • 63 (a)
-- 36
  • 55 (a)
(Monodelphis domestica)
Mammalia -- 36
  • 35 (a)
-- 36
  • 40 (a)
(Mus musculus)
Mammalia Trav10d 36
  • 67 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 33 (a)
Species with no ortholog for TRAV13-1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRAV13-1 Gene

Gene Tree for TRAV13-1 (if available)
Gene Tree for TRAV13-1 (if available)

Paralogs for TRAV13-1 Gene Pseudogenes for TRAV13-1 Gene

genes like me logo Genes that share paralogs with TRAV13-1: view

Variants for TRAV13-1 Gene

Relevant External Links for TRAV13-1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRAV13-1 Gene

Disorders for TRAV13-1 Gene

No disorders were found for TRAV13-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRAV13-1 Gene

Publications for TRAV13-1 Gene

  1. The human T-cell receptor TCRAC/TCRDC (C alpha/C delta) region: organization, sequence, and evolution of 97.6 kb of DNA. (PMID: 8188290) Koop B.F. … Hood L. (Genomics 1994) 2 3 67

Products for TRAV13-1 Gene

Sources for TRAV13-1 Gene

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