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Aliases for TRA-TGC6-1 Gene

Subcategory (RNA class) for TRA-TGC6-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRA-TGC6-1 Gene

  • Transfer RNA-Ala (TGC) 6-1 2 3
  • Transfer RNA Alanine 11 (Anticodon UGC) 2 3
  • TRNA-Ala-TGC-6-1 3
  • TRNAA11 3

External Ids for TRA-TGC6-1 Gene

ORGUL Members for TRA-TGC6-1 Gene

Previous HGNC Symbols for TRA-TGC6-1 Gene

  • TRNAA11

Summaries for TRA-TGC6-1 Gene

GeneCards Summary for TRA-TGC6-1 Gene

TRA-TGC6-1 (Transfer RNA-Ala (TGC) 6-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRA-TGC6-1 Gene

Genomics for TRA-TGC6-1 Gene

Regulatory Elements for TRA-TGC6-1 Gene

Enhancers for TRA-TGC6-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G028755 1.7 Ensembl ENCODE dbSUPER 0.7 +0.8 839 3.3 CREB3L1 ZFP64 DMAP1 SP3 MEF2D ZNF610 NBN KDM1A WT1 SALL1 TRIM27 ZKSCAN3 ZFP57 ZKSCAN4 ZKSCAN8 ZNF603P ZSCAN9 ZNF602P GC06M028760 TRA-TGC6-1
GH06G028754 0.9 dbSUPER 0.7 +3.8 3777 0.9 ATF1 ZNF766 ELK1 KLF13 ZNF592 MEF2D CREB3 NR2C1 KDM1A BRD4 TRIM27 ZNF603P LINC01556 TRA-TGC6-1 GC06M028760 TRK-TTT7-1
GH06G028752 1.3 ENCODE dbSUPER 0.4 +5.7 5671 0.9 HDGF PKNOX1 ATF1 CREB3L1 ARNT SIN3A ZNF121 GTF3C2 KDM4B KLF13 ZKSCAN3 TRIM27 ZKSCAN4 ZKSCAN8 ZSCAN9 ZNF603P GC06M028760 TRK-TTT7-1 TRA-TGC6-1
GH06G028750 1 dbSUPER 0.4 +7.2 7193 1.8 HDGF CREB3L1 ARNT ZNF2 TCF12 ZNF766 GATA2 KLF13 SP3 REST TRIM27 ZNF603P GPX5 ZKSCAN3 TRK-TTT7-1 TRA-TGC6-1 GC06M028760
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRA-TGC6-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRA-TGC6-1 Gene

Chromosome:
6
Start:
28,758,364 bp from pter
End:
28,758,435 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRA-TGC6-1 Gene

Genes around TRA-TGC6-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRA-TGC6-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRA-TGC6-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRA-TGC6-1 Gene

Post-translational modifications for TRA-TGC6-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRA-TGC6-1 Gene

Domains & Families for TRA-TGC6-1 Gene

Gene Families for TRA-TGC6-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRA-TGC6-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRA-TGC6-1 Gene

Function for TRA-TGC6-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRA-TGC6-1 Gene

Localization for TRA-TGC6-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRA-TGC6-1 Gene

Pathways & Interactions for TRA-TGC6-1 Gene

SuperPathways for TRA-TGC6-1 Gene

No Data Available

Interacting Proteins for TRA-TGC6-1 Gene

Gene Ontology (GO) - Biological Process for TRA-TGC6-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRA-TGC6-1 Gene

Drugs & Compounds for TRA-TGC6-1 Gene

No Compound Related Data Available

Transcripts for TRA-TGC6-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRA-TGC6-1 Gene

No ASD Table

Relevant External Links for TRA-TGC6-1 Gene

GeneLoc Exon Structure for
TRA-TGC6-1
ECgene alternative splicing isoforms for
TRA-TGC6-1

No data available for mRNA/cDNA for TRA-TGC6-1 Gene

Expression for TRA-TGC6-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRA-TGC6-1 Gene

Orthologs for TRA-TGC6-1 Gene

No data available for Orthologs and Evolution for TRA-TGC6-1 Gene

Paralogs for TRA-TGC6-1 Gene

No data available for Paralogs for TRA-TGC6-1 Gene

Variants for TRA-TGC6-1 Gene

Relevant External Links for TRA-TGC6-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRA-TGC6-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRA-TGC6-1 Gene

Disorders for TRA-TGC6-1 Gene

No disorders were found for TRA-TGC6-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRA-TGC6-1 Gene

Publications for TRA-TGC6-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRA-TGC6-1 Gene

Sources for TRA-TGC6-1 Gene

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