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Aliases for TPTE2P5 Gene

Aliases for TPTE2P5 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5 2 3 5

External Ids for TPTE2P5 Gene

Previous GeneCards Identifiers for TPTE2P5 Gene

  • GC00U933134
  • GC13M041397

Summaries for TPTE2P5 Gene

GeneCards Summary for TPTE2P5 Gene

TPTE2P5 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5) is a Pseudogene.

Additional gene information for TPTE2P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPTE2P5 Gene

Genomics for TPTE2P5 Gene

Regulatory Elements for TPTE2P5 Gene

Enhancers for TPTE2P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H041056 1.7 Ensembl ENCODE dbSUPER 20.2 -139.5 -139543 9.7 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZNF610 ZNF585B GLIS1 NAA16 WBP4 TPTE2P5 LINC00548 MTRF1 RNU6-57P CYCSP34 ELF1
GH13H040661 1.6 Ensembl ENCODE dbSUPER 11 +256.7 256735 7.2 HDGF PKNOX1 ARID4B SIN3A FEZF1 ZNF2 ZNF143 ZNF207 FOS SP3 NAA16 LINC00548 TPTE2P5 CYCSP34 SLC25A15 FOXO1 PIR36841
GH13H040584 1.4 Ensembl ENCODE dbSUPER 12 +333.5 333540 6.9 PKNOX1 TBL1XR1 ARID4B BMI1 BATF RAD21 ATF7 ETV6 RUNX3 IKZF2 TPTE2P5 FOXO1 COG6 SLC25A15 WBP4 RLIMP1 GC13P040543
GH13H041456 1.3 ENCODE dbSUPER 11.8 -540.3 -540250 10.9 HDGF ATF1 ARNT ZNF493 SIN3A TCF12 ZNF766 GATA2 ZNF143 FOS NAA16 TPTE2P5 RGCC GC13P041459 GC13P041458 LOC105370174
GH13H040636 1.2 Ensembl ENCODE dbSUPER 11 +282.8 282811 4.2 JUN ZNF140 NR2F2 JUND PRDM6 ATF3 FOS NR2F6 ZNF600 TRIM28 NAA16 FOXO1 TPTE2P5 COG6 CYCSP34 WBP4 GC13P040625 PIR36841
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Promoters for TPTE2P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Locations for TPTE2P5 Gene

Genomic Locations for TPTE2P5 Gene
124,766 bases
Minus strand

Genomic View for TPTE2P5 Gene

Genes around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P5 Gene

Proteins for TPTE2P5 Gene

Post-translational modifications for TPTE2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P5 Gene

Domains & Families for TPTE2P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPTE2P5 Gene

Function for TPTE2P5 Gene

Phenotypes From GWAS Catalog for TPTE2P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P5 Gene

Localization for TPTE2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPTE2P5 Gene

Pathways & Interactions for TPTE2P5 Gene

SuperPathways for TPTE2P5 Gene

No Data Available

Interacting Proteins for TPTE2P5 Gene

Gene Ontology (GO) - Biological Process for TPTE2P5 Gene


No data available for Pathways by source and SIGNOR curated interactions for TPTE2P5 Gene

Drugs & Compounds for TPTE2P5 Gene

No Compound Related Data Available

Transcripts for TPTE2P5 Gene

mRNA/cDNA for TPTE2P5 Gene

(8) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPTE2P5 Gene

Transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P5 Gene

No ASD Table

Relevant External Links for TPTE2P5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TPTE2P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPTE2P5 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P5 Gene

This gene is overexpressed in Thyroid (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of TPTE2P5 Gene:


SOURCE GeneReport for Unigene cluster for TPTE2P5 Gene:

genes like me logo Genes that share expression patterns with TPTE2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPTE2P5 Gene

Orthologs for TPTE2P5 Gene

Evolution for TPTE2P5 Gene

Gene Tree for TPTE2P5 (if available)
Gene Tree for TPTE2P5 (if available)

No data available for Orthologs for TPTE2P5 Gene

Paralogs for TPTE2P5 Gene

No data available for Paralogs for TPTE2P5 Gene

Variants for TPTE2P5 Gene

Sequence variations from dbSNP and Humsavar for TPTE2P5 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs104894424 Pathogenic 40,807,379(+) TTCGA(A/G)AAGTA intron-variant, reference, missense
rs104894429 Pathogenic 40,807,376(+) TACTT(C/T)GAGAA intron-variant, reference, stop-gained
rs104894430 Pathogenic 40,799,080(+) TGACC(A/G)GGCAG nc-transcript-variant, reference, missense
rs104894431 Pathogenic 40,809,585(+) GATTC(A/G)AGCAT intron-variant, upstream-variant-2KB, reference, missense
rs121908533 Pathogenic 40,799,111(+) GAAGA(C/G/T)GCAGA nc-transcript-variant, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for TPTE2P5 Gene

Variant ID Type Subtype PubMed ID
nsv974083 CNV duplication 23825009
nsv974082 CNV duplication 23825009
nsv1122811 CNV deletion 24896259
nsv1113561 CNV deletion 24896259
nsv1069747 CNV deletion 25765185
esv3892332 CNV gain 25118596
esv2747295 CNV deletion 23290073
esv2747294 CNV deletion 23290073

Relevant External Links for TPTE2P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TPTE2P5 Gene

Disorders for TPTE2P5 Gene

Relevant External Links for TPTE2P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for TPTE2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P5 Gene

Publications for TPTE2P5 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for TPTE2P5 Gene

Sources for TPTE2P5 Gene

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