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Aliases for TPTE2P5 Gene

Aliases for TPTE2P5 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5 2 3 5

External Ids for TPTE2P5 Gene

Previous GeneCards Identifiers for TPTE2P5 Gene

  • GC00U933134
  • GC13M041397

Summaries for TPTE2P5 Gene

GeneCards Summary for TPTE2P5 Gene

TPTE2P5 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPTE2P5 Gene

Genomics for TPTE2P5 Gene

Regulatory Elements for TPTE2P5 Gene

Enhancers for TPTE2P5 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Promoters for TPTE2P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPTE2P5 Gene

Chromosome:
13
Start:
40,796,985 bp from pter
End:
40,921,750 bp from pter
Size:
124,766 bases
Orientation:
Minus strand

Genomic View for TPTE2P5 Gene

Genes around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P5 Gene

Proteins for TPTE2P5 Gene

Post-translational modifications for TPTE2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P5 Gene

Domains & Families for TPTE2P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPTE2P5 Gene

Function for TPTE2P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P5 Gene

Localization for TPTE2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPTE2P5 Gene

Pathways & Interactions for TPTE2P5 Gene

SuperPathways for TPTE2P5 Gene

No Data Available

Interacting Proteins for TPTE2P5 Gene

Gene Ontology (GO) - Biological Process for TPTE2P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPTE2P5 Gene

Drugs & Compounds for TPTE2P5 Gene

No Compound Related Data Available

Transcripts for TPTE2P5 Gene

mRNA/cDNA for TPTE2P5 Gene

(8) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPTE2P5 Gene

Transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P5 Gene

No ASD Table

Relevant External Links for TPTE2P5 Gene

GeneLoc Exon Structure for
TPTE2P5
ECgene alternative splicing isoforms for
TPTE2P5

Expression for TPTE2P5 Gene

mRNA expression in normal human tissues for TPTE2P5 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P5 Gene

This gene is overexpressed in Thyroid (x4.4).

SOURCE GeneReport for Unigene cluster for TPTE2P5 Gene Hs.660718

genes like me logo Genes that share expression patterns with TPTE2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TPTE2P5 Gene

Orthologs for TPTE2P5 Gene

Evolution for TPTE2P5 Gene

ENSEMBL:
Gene Tree for TPTE2P5 (if available)
TreeFam:
Gene Tree for TPTE2P5 (if available)

No data available for Orthologs for TPTE2P5 Gene

Paralogs for TPTE2P5 Gene

No data available for Paralogs for TPTE2P5 Gene

Variants for TPTE2P5 Gene

Sequence variations from dbSNP and Humsavar for TPTE2P5 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs3610 -- 40,871,334(-) ATATT(C/G)TTTTT intron-variant
rs1055588 -- 40,871,306(-) AATGT(A/T)AATGA intron-variant
rs2149570 -- 40,858,533(+) ATATA(G/T)AGAGA intron-variant
rs2149571 -- 40,861,978(+) ACtgt(C/G)tgtgt intron-variant
rs2149572 -- 40,862,011(+) gtgtg(A/T)gtttg intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TPTE2P5 Gene

Disorders for TPTE2P5 Gene

Relevant External Links for TPTE2P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TPTE2P5

No disorders were found for TPTE2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P5 Gene

Publications for TPTE2P5 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for TPTE2P5 Gene

Sources for TPTE2P5 Gene

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