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Aliases for TPTE2P5 Gene

Aliases for TPTE2P5 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5 2 3 5

External Ids for TPTE2P5 Gene

Previous GeneCards Identifiers for TPTE2P5 Gene

  • GC00U933134
  • GC13M041397

Summaries for TPTE2P5 Gene

GeneCards Summary for TPTE2P5 Gene

TPTE2P5 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPTE2P5 Gene

Genomics for TPTE2P5 Gene

Regulatory Elements for TPTE2P5 Gene

Enhancers for TPTE2P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G041456 1.3 ENCODE dbSUPER 11.7 -540.3 -540250 10.9 HDGF CREB3L1 ARNT SIN3A ZNF2 ZNF766 CBX5 ZNF143 ZNF207 ZNF548 TPTE2P5 RGCC GC13P041459 GC13P041458 LOC105370174
GH13G040636 1.2 Ensembl ENCODE dbSUPER 11.8 +282.8 282811 4.2 ZNF571 JUN ZNF140 NR2F2 ZNF507 JUND PRDM6 ATF3 GATA2 ZNF600 FOXO1 TPTE2P5 WBP4 GC13P040625 PIR36841
GH13G041131 1.1 ENCODE 9.7 -211.2 -211210 2.4 HDGF CREB3L1 ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 CBX5 TPTE2P5 KBTBD7 LOC101929140 GC13P041139
GH13G040894 0.8 ENCODE 13.3 +25.9 25901 2.8 ELF3 TBP FOXA2 RARA CREM THAP11 PPARG TBX21 CEBPA HNF4A SUGT1P3 TPTE2P5 MRPS31 GC13P040904 PIR47174
GH13G040942 0.6 dbSUPER 12.3 -24.2 -24230 6.6 CEBPG FEZF1 ATF2 PRDM6 ZNF316 ZNF589 ZSCAN5C MAFK SUGT1P3 TPTE2P5 CYCSP34 WBP4 PIR56183
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Promoters for TPTE2P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000061720 250 1401 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207

Genomic Location for TPTE2P5 Gene

40,796,985 bp from pter
40,921,750 bp from pter
124,766 bases
Minus strand

Genomic View for TPTE2P5 Gene

Genes around TPTE2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P5 Gene

Proteins for TPTE2P5 Gene

Post-translational modifications for TPTE2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P5 Gene

Domains & Families for TPTE2P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPTE2P5 Gene

Function for TPTE2P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P5 Gene

Localization for TPTE2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPTE2P5 Gene

Pathways & Interactions for TPTE2P5 Gene

SuperPathways for TPTE2P5 Gene

No Data Available

Interacting Proteins for TPTE2P5 Gene

Gene Ontology (GO) - Biological Process for TPTE2P5 Gene


No data available for Pathways by source and SIGNOR curated interactions for TPTE2P5 Gene

Drugs & Compounds for TPTE2P5 Gene

No Compound Related Data Available

Transcripts for TPTE2P5 Gene

mRNA/cDNA for TPTE2P5 Gene

(8) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPTE2P5 Gene

Transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P5 Gene

No ASD Table

Relevant External Links for TPTE2P5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TPTE2P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPTE2P5 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P5 Gene

This gene is overexpressed in Thyroid (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of TPTE2P5 Gene:


SOURCE GeneReport for Unigene cluster for TPTE2P5 Gene:

genes like me logo Genes that share expression patterns with TPTE2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPTE2P5 Gene

Orthologs for TPTE2P5 Gene

Evolution for TPTE2P5 Gene

Gene Tree for TPTE2P5 (if available)
Gene Tree for TPTE2P5 (if available)

No data available for Orthologs for TPTE2P5 Gene

Paralogs for TPTE2P5 Gene

No data available for Paralogs for TPTE2P5 Gene

Variants for TPTE2P5 Gene

Sequence variations from dbSNP and Humsavar for TPTE2P5 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs104894424 Pathogenic 40,807,379(+) TTCGA(A/G)AAGTA intron-variant, reference, missense
rs104894429 Pathogenic 40,807,376(+) TACTT(C/T)GAGAA intron-variant, reference, stop-gained
rs104894430 Pathogenic 40,799,080(+) TGACC(A/G)GGCAG nc-transcript-variant, reference, missense
rs104894431 Pathogenic 40,809,585(+) GATTC(A/G)AGCAT intron-variant, upstream-variant-2KB, reference, missense
rs121908533 Pathogenic 40,799,111(+) GAAGA(C/G/T)GCAGA nc-transcript-variant, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for TPTE2P5 Gene

Variant ID Type Subtype PubMed ID
esv2747294 CNV deletion 23290073
esv2747295 CNV deletion 23290073
esv3892332 CNV gain 25118596
nsv1069747 CNV deletion 25765185
nsv1113561 CNV deletion 24896259
nsv1122811 CNV deletion 24896259
nsv974082 CNV duplication 23825009
nsv974083 CNV duplication 23825009

Relevant External Links for TPTE2P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TPTE2P5 Gene

Disorders for TPTE2P5 Gene

Relevant External Links for TPTE2P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for TPTE2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P5 Gene

Publications for TPTE2P5 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for TPTE2P5 Gene

Sources for TPTE2P5 Gene

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