Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TPTE2P2 Gene

Aliases for TPTE2P2 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 2 2 3 5

External Ids for TPTE2P2 Gene

Previous GeneCards Identifiers for TPTE2P2 Gene

  • GC13M052794
  • GC13M033608

Summaries for TPTE2P2 Gene

GeneCards Summary for TPTE2P2 Gene

TPTE2P2 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 2) is a Pseudogene.

Additional gene information for TPTE2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPTE2P2 Gene

Genomics for TPTE2P2 Gene

Regulatory Elements for TPTE2P2 Gene

Enhancers for TPTE2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H052193 1.7 FANTOM5 ENCODE dbSUPER 15.1 +139.7 139686 2 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 ZC3H11A NFYC ALG11 SUGT1 CKAP2 RPS4XP16 INTS6 UTP14C INTS6-AS1 MRPS31P5 TPTE2P2 SERPINE3
GH13H052158 1.6 Ensembl ENCODE dbSUPER 14.9 +173.3 173263 5 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 TCF12 ZNF121 NEK3 TPTE2P2 ATP7B NEK5 THSD1P1
GH13H052347 1.4 FANTOM5 Ensembl ENCODE 15.4 -14.4 -14388 3 PKNOX1 KLF17 BATF ZEB1 ZNF121 ZNF366 ZSCAN5C SCRT2 FOS EGR2 TPTE2P2 ENSG00000244471 TPTE2P3 CKAP2 THSD1 LOC105370207 GC13P052401
GH13H052616 1.4 FANTOM5 ENCODE 15.1 -283.2 -283197 2 PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 TPTE2P2 UTP14C ALG11 HNRNPA1L2 ENSG00000273723
GH13H052448 1.3 ENCODE dbSUPER 15.5 -115.5 -115510 3 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF207 ZNF143 SP5 MXD4 NFYC CKAP2 VPS36 TPTE2P2 HNRNPA1L2 THSD1 INTS6-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPTE2P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPTE2P2 Gene

Chromosome:
13
Start:
52,219,334 bp from pter
End:
52,334,284 bp from pter
Size:
114,951 bases
Orientation:
Minus strand

Genomic View for TPTE2P2 Gene

Genes around TPTE2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P2 Gene

Proteins for TPTE2P2 Gene

Post-translational modifications for TPTE2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P2 Gene

Domains & Families for TPTE2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPTE2P2 Gene

Function for TPTE2P2 Gene

Phenotypes for TPTE2P2 Gene

GenomeRNAi human phenotypes for TPTE2P2:
genes like me logo Genes that share phenotypes with TPTE2P2: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TPTE2P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P2 Gene

Localization for TPTE2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPTE2P2 Gene

Pathways & Interactions for TPTE2P2 Gene

SuperPathways for TPTE2P2 Gene

No Data Available

Interacting Proteins for TPTE2P2 Gene

Gene Ontology (GO) - Biological Process for TPTE2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPTE2P2 Gene

Drugs & Compounds for TPTE2P2 Gene

No Compound Related Data Available

Transcripts for TPTE2P2 Gene

mRNA/cDNA for TPTE2P2 Gene

(3) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPTE2P2 Gene

Transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 2:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TPTE2P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P2 Gene

No ASD Table

Relevant External Links for TPTE2P2 Gene

GeneLoc Exon Structure for
TPTE2P2
ECgene alternative splicing isoforms for
TPTE2P2

Expression for TPTE2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPTE2P2 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P2 Gene

This gene is overexpressed in Testis (x16.2).

NURSA nuclear receptor signaling pathways regulating expression of TPTE2P2 Gene:

TPTE2P2

SOURCE GeneReport for Unigene cluster for TPTE2P2 Gene:

Hs.678973
genes like me logo Genes that share expression patterns with TPTE2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPTE2P2 Gene

Orthologs for TPTE2P2 Gene

Evolution for TPTE2P2 Gene

ENSEMBL:
Gene Tree for TPTE2P2 (if available)
TreeFam:
Gene Tree for TPTE2P2 (if available)

No data available for Orthologs for TPTE2P2 Gene

Paralogs for TPTE2P2 Gene

No data available for Paralogs for TPTE2P2 Gene

Variants for TPTE2P2 Gene

Sequence variations from dbSNP and Humsavar for TPTE2P2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000027263 -- 52,279,987(+) CAGAC(A/T)CCATT intron-variant
rs1000065774 -- 52,219,088(+) ATATA(A/C)ATTAG nc-transcript-variant
rs1000138707 -- 52,220,944(+) GCAAT(C/T)TGCCT intron-variant
rs1000160694 -- 52,313,109(+) GCCCC(-/ACAA)ACAGA intron-variant
rs1000221948 -- 52,311,280(+) AAAAC(A/G)TTTAT intron-variant

Relevant External Links for TPTE2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPTE2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPTE2P2 Gene

Disorders for TPTE2P2 Gene

Relevant External Links for TPTE2P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TPTE2P2

No disorders were found for TPTE2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P2 Gene

Publications for TPTE2P2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for TPTE2P2 Gene

Sources for TPTE2P2 Gene

Content
Loading form....