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Aliases for TPTE2P2 Gene

Aliases for TPTE2P2 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 2 2 3 5

External Ids for TPTE2P2 Gene

Previous GeneCards Identifiers for TPTE2P2 Gene

  • GC13M052794
  • GC13M033608

Summaries for TPTE2P2 Gene

GeneCards Summary for TPTE2P2 Gene

TPTE2P2 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPTE2P2 Gene

Genomics for TPTE2P2 Gene

Regulatory Elements for TPTE2P2 Gene

Enhancers for TPTE2P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F052193 1.5 FANTOM5 ENCODE 15.1 +139.7 139686 2.6 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ALG11 CKAP2 UTP14C TPTE2P2 RPS4XP16 SERPINE3 ATP7B MRPS31P5 PIR51896
GH13F052347 1.4 FANTOM5 Ensembl ENCODE 15.4 -14.4 -14388 3.0 PKNOX1 KLF17 BMI1 ZEB1 ZNF121 CBX5 ZNF366 SCRT2 FOS CREM TPTE2P2 ENSG00000244471 TPTE2P3 CKAP2 THSD1 LOC105370207 GC13P052401
GH13F052616 1.4 FANTOM5 ENCODE 15.1 -283.2 -283197 2.0 PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ALG11 TPTE2P2 UTP14C HNRNPA1L2 ENSG00000273723
GH13F052158 1.3 Ensembl ENCODE 14.9 +173.2 173210 5.5 CREB3L1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF48 YY1 ZNF121 NEK3 TPTE2P2 ATP7B NEK5 THSD1P1
GH13F052650 1.1 ENCODE 16 -318.3 -318342 3.7 CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ALG11 CKAP2 TPTE2P2 UTP14C ENSG00000273723 SUGT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPTE2P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPTE2P2 Gene

Chromosome:
13
Start:
52,219,334 bp from pter
End:
52,334,284 bp from pter
Size:
114,951 bases
Orientation:
Minus strand

Genomic View for TPTE2P2 Gene

Genes around TPTE2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P2 Gene

Proteins for TPTE2P2 Gene

Post-translational modifications for TPTE2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P2 Gene

Domains & Families for TPTE2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPTE2P2 Gene

Function for TPTE2P2 Gene

Phenotypes for TPTE2P2 Gene

GenomeRNAi human phenotypes for TPTE2P2:
genes like me logo Genes that share phenotypes with TPTE2P2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P2 Gene

Localization for TPTE2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPTE2P2 Gene

Pathways & Interactions for TPTE2P2 Gene

SuperPathways for TPTE2P2 Gene

No Data Available

Interacting Proteins for TPTE2P2 Gene

Gene Ontology (GO) - Biological Process for TPTE2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPTE2P2 Gene

Transcripts for TPTE2P2 Gene

mRNA/cDNA for TPTE2P2 Gene

(3) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPTE2P2 Gene

Transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P2 Gene

No ASD Table

Relevant External Links for TPTE2P2 Gene

GeneLoc Exon Structure for
TPTE2P2
ECgene alternative splicing isoforms for
TPTE2P2

Expression for TPTE2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPTE2P2 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P2 Gene

This gene is overexpressed in Testis (x16.2).

NURSA nuclear receptor signaling pathways regulating expression of TPTE2P2 Gene:

TPTE2P2

SOURCE GeneReport for Unigene cluster for TPTE2P2 Gene:

Hs.678973
genes like me logo Genes that share expression patterns with TPTE2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TPTE2P2 Gene

Orthologs for TPTE2P2 Gene

Evolution for TPTE2P2 Gene

ENSEMBL:
Gene Tree for TPTE2P2 (if available)
TreeFam:
Gene Tree for TPTE2P2 (if available)

No data available for Orthologs for TPTE2P2 Gene

Paralogs for TPTE2P2 Gene

No data available for Paralogs for TPTE2P2 Gene

Variants for TPTE2P2 Gene

Sequence variations from dbSNP and Humsavar for TPTE2P2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs10623585 -- 52,281,150(+) GTGTG(-/GT)TGTGT intron-variant
rs111245189 -- 52,266,146(+) ACTCC(A/G)TCTCA intron-variant
rs111263795 -- 52,314,929(+) GGAAG(A/T)CACTC intron-variant
rs111292553 -- 52,237,915(+) CCTAA(A/G)ACAGA intron-variant
rs111313161 -- 52,245,827(+) CTTTA(A/C)GTTCT intron-variant

Relevant External Links for TPTE2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPTE2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPTE2P2 Gene

Disorders for TPTE2P2 Gene

Relevant External Links for TPTE2P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TPTE2P2

No disorders were found for TPTE2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P2 Gene

Publications for TPTE2P2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for TPTE2P2 Gene

Sources for TPTE2P2 Gene

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