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Aliases for TPTE2P1 Gene

Aliases for TPTE2P1 Gene

  • Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 1 2 3 5

External Ids for TPTE2P1 Gene

Previous GeneCards Identifiers for TPTE2P1 Gene

  • GC00U922913
  • GC13M025499
  • GC13M006316

Summaries for TPTE2P1 Gene

GeneCards Summary for TPTE2P1 Gene

TPTE2P1 (Transmembrane Phosphoinositide 3-Phosphatase And Tensin Homolog 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPTE2P1 Gene

Genomics for TPTE2P1 Gene

Regulatory Elements for TPTE2P1 Gene

Enhancers for TPTE2P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TPTE2P1 on UCSC Golden Path with GeneCards custom track

Promoters for TPTE2P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TPTE2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPTE2P1 Gene

Chromosome:
13
Start:
24,924,677 bp from pter
End:
24,968,487 bp from pter
Size:
43,811 bases
Orientation:
Minus strand

Genomic View for TPTE2P1 Gene

Genes around TPTE2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPTE2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPTE2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPTE2P1 Gene

Proteins for TPTE2P1 Gene

  • Protein details for TPTE2P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T6R2-TPT2L_HUMAN
    Recommended name:
    Putative phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2P1
    Protein Accession:
    Q5T6R2
    Secondary Accessions:
    • B3KST4
    • B4DMH9

    Protein attributes for TPTE2P1 Gene

    Size:
    138 amino acids
    Molecular mass:
    15541 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TPTE2P1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for TPTE2P1 Gene

Proteomics data for TPTE2P1 Gene at MOPED

Post-translational modifications for TPTE2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPTE2P1 Gene

Domains & Families for TPTE2P1 Gene

Protein Domains for TPTE2P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TPTE2P1 Gene

Graphical View of Domain Structure for InterPro Entry

Q5T6R2

UniProtKB/Swiss-Prot:

TPT2L_HUMAN :
  • Contains 1 C2 tensin-type domain.
Domain:
  • Contains 1 C2 tensin-type domain.
genes like me logo Genes that share domains with TPTE2P1: view

No data available for Gene Families for TPTE2P1 Gene

Function for TPTE2P1 Gene

Phenotypes for TPTE2P1 Gene

GenomeRNAi human phenotypes for TPTE2P1:
genes like me logo Genes that share phenotypes with TPTE2P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPTE2P1 Gene

Localization for TPTE2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPTE2P1 Gene

Pathways & Interactions for TPTE2P1 Gene

SuperPathways for TPTE2P1 Gene

No Data Available

Interacting Proteins for TPTE2P1 Gene

Gene Ontology (GO) - Biological Process for TPTE2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPTE2P1 Gene

Drugs & Compounds for TPTE2P1 Gene

No Compound Related Data Available

Transcripts for TPTE2P1 Gene

mRNA/cDNA for TPTE2P1 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPTE2P1 Gene

Transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPTE2P1 Gene

No ASD Table

Relevant External Links for TPTE2P1 Gene

GeneLoc Exon Structure for
TPTE2P1
ECgene alternative splicing isoforms for
TPTE2P1

Expression for TPTE2P1 Gene

mRNA expression in normal human tissues for TPTE2P1 Gene

mRNA differential expression in normal tissues according to GTEx for TPTE2P1 Gene

This gene is overexpressed in Thyroid (x5.7), Brain - Cerebellar Hemisphere (x5.5), and Brain - Cerebellum (x5.0).

Protein differential expression in normal tissues from HIPED for TPTE2P1 Gene

This gene is overexpressed in Heart (47.6) and Pancreatic juice (21.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TPTE2P1 Gene



SOURCE GeneReport for Unigene cluster for TPTE2P1 Gene Hs.620592

genes like me logo Genes that share expression patterns with TPTE2P1: view

Protein tissue co-expression partners for TPTE2P1 Gene

- Elite partner

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for TPTE2P1 Gene

Orthologs for TPTE2P1 Gene

Evolution for TPTE2P1 Gene

ENSEMBL:
Gene Tree for TPTE2P1 (if available)
TreeFam:
Gene Tree for TPTE2P1 (if available)

No data available for Orthologs for TPTE2P1 Gene

Paralogs for TPTE2P1 Gene

(4) SIMAP similar genes for TPTE2P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TPTE2P1: view

No data available for Paralogs for TPTE2P1 Gene

Variants for TPTE2P1 Gene

Sequence variations from dbSNP and Humsavar for TPTE2P1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1141813 -- 24,957,091(-) ATAAA(A/C/G/T)GGTCT intron-variant
rs1810931 -- 24,941,506(+) CACCA(C/G)ATGCT intron-variant
rs1810932 -- 24,941,594(+) CCCCG(G/T)GCCCC intron-variant
rs1813538 -- 24,958,256(-) AATAA(A/G)TGTTA intron-variant
rs2151430 -- 24,967,069(-) CTATG(A/C)TGTAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TPTE2P1 Gene

Variant ID Type Subtype PubMed ID
nsv899941 CNV Gain 21882294
nsv442664 CNV CNV 18776908
esv28932 CNV Loss 19812545
esv273545 CNV Insertion 20981092
nsv964 CNV Loss 18451855

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for TPTE2P1 Gene

Disorders for TPTE2P1 Gene

Relevant External Links for TPTE2P1

Genetic Association Database (GAD)
TPTE2P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TPTE2P1

No disorders were found for TPTE2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPTE2P1 Gene

Publications for TPTE2P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for TPTE2P1 Gene

Sources for TPTE2P1 Gene

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