Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TPT1-AS1 Gene

Subcategory (RNA class) for TPT1-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TPT1-AS1 Gene

  • TPT1 Antisense RNA 1 2 3
  • TPT1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TPT1-AS1 Gene

ORGUL Members for TPT1-AS1 Gene

Summaries for TPT1-AS1 Gene

GeneCards Summary for TPT1-AS1 Gene

TPT1-AS1 (TPT1 Antisense RNA 1) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPT1-AS1 Gene

Genomics for TPT1-AS1 Gene

Genomic Location for TPT1-AS1 Gene

Start:
45,341,345 bp from pter
End:
45,393,413 bp from pter
Size:
52,069 bases
Orientation:
Plus strand

Genomic View for TPT1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TPT1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPT1-AS1 Gene

No data available for Regulatory Elements for TPT1-AS1 Gene

Proteins for TPT1-AS1 Gene

Post-translational modifications for TPT1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPT1-AS1 Gene

Domains for TPT1-AS1 Gene

Gene Families for TPT1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with TPT1-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for TPT1-AS1 Gene

Function for TPT1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TPT1-AS1 Gene

Localization for TPT1-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for TPT1-AS1 Gene

Pathways for TPT1-AS1 Gene

SuperPathways for TPT1-AS1 Gene

No Data Available

Interacting Proteins for TPT1-AS1 Gene

Gene Ontology (GO) - Biological Process for TPT1-AS1 Gene

None

No data available for Pathways by source for TPT1-AS1 Gene

Transcripts for TPT1-AS1 Gene

mRNA/cDNA for TPT1-AS1 Gene

(4) Additional mRNA sequences :
(25) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPT1-AS1 Gene

TPT1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TPT1-AS1 Gene

No ASD Table

Relevant External Links for TPT1-AS1 Gene

GeneLoc Exon Structure for
TPT1-AS1
ECgene alternative splicing isoforms for
TPT1-AS1

Expression for TPT1-AS1 Gene

mRNA expression in normal human tissues for TPT1-AS1 Gene

SOURCE GeneReport for Unigene cluster for TPT1-AS1 Gene Hs.375766

genes like me logo Genes that share expressions with TPT1-AS1: view

Orthologs for TPT1-AS1 Gene

Evolution for TPT1-AS1 Gene

ENSEMBL:
Gene Tree for TPT1-AS1 (if available)
TreeFam:
Gene Tree for TPT1-AS1 (if available)

No data available for Orthologs for TPT1-AS1 Gene

Paralogs for TPT1-AS1 Gene

No data available for Paralogs for TPT1-AS1 Gene

Variants for TPT1-AS1 Gene

Sequence variations from dbSNP and Humsavar for TPT1-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs727799 -- 45,344,383(-) tcgct(C/T)gaacc nc-transcript-variant
rs1061137 -- 45,391,063(+) GCCAT(A/C)CCCAT nc-transcript-variant
rs1061143 -- 45,391,129(+) GAGCT(C/G/T)GTCGA nc-transcript-variant
rs1061183 -- 45,391,362(+) GGCCG(A/G)GAGGG nc-transcript-variant
rs1138391 -- 45,391,410(+) TGGGG(A/G)CTCGG nc-transcript-variant

Relevant External Links for TPT1-AS1 Gene

HapMap Linkage Disequilibrium report
TPT1-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for TPT1-AS1 Gene

Disorders for TPT1-AS1 Gene

No disorders were found for TPT1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for TPT1-AS1 Gene

Publications for TPT1-AS1 Gene

No publications were found for TPT1-AS1 Gene.

Products for TPT1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TPT1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TPT1-AS1
    • Block miRNA regulation of TPT1-AS1 using miScript Target Protectors

    Sources for TPT1-AS1 Gene

    Back to Top

    Content