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Aliases for TPT1 Gene

Aliases for TPT1 Gene

  • Tumor Protein, Translationally-Controlled 1 2 3 5
  • Histamine-Releasing Factor 3 4
  • Fortilin 3 4
  • TCTP 3 4
  • P23 3 4
  • HRF 3 4
  • Translationally-Controlled Tumor Protein 3
  • P02 3

External Ids for TPT1 Gene

Previous GeneCards Identifiers for TPT1 Gene

  • GC13M043911
  • GC13M039897
  • GC13M044847
  • GC13M043709
  • GC13M044810
  • GC13M044673
  • GC13M044815
  • GC13M044818
  • GC13M044821
  • GC13M044824
  • GC13M044827
  • GC13M044830
  • GC13M045912
  • GC13M045914
  • GC13M026712
  • GC13M045917
  • GC13M045921
  • GC13M045924
  • GC13M045937
  • GC13M045943
  • GC13M045955
  • GC13M045973

Summaries for TPT1 Gene

GeneCards Summary for TPT1 Gene

TPT1 (Tumor Protein, Translationally-Controlled 1) is a Protein Coding gene. Diseases associated with TPT1 include Urticaria and Allergic Rhinitis. Among its related pathways are Cytoskeletal Signaling and Ca, cAMP and Lipid Signaling. GO annotations related to this gene include poly(A) RNA binding and transcription factor binding.

UniProtKB/Swiss-Prot for TPT1 Gene

  • Involved in calcium binding and microtubule stabilization.

Gene Wiki entry for TPT1 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPT1 Gene

Genomics for TPT1 Gene

Regulatory Elements for TPT1 Gene

Enhancers for TPT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around TPT1 on UCSC Golden Path with GeneCards custom track

Promoters for TPT1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for TPT1 Gene

45,333,471 bp from pter
45,341,370 bp from pter
7,900 bases
Minus strand

Genomic View for TPT1 Gene

Genes around TPT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPT1 Gene

Proteins for TPT1 Gene

  • Protein details for TPT1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Translationally-controlled tumor protein
    Protein Accession:
    Secondary Accessions:
    • B2R7E5
    • Q6YLS2
    • Q7Z4J4
    • Q8TBK7
    • Q96EE2
    • Q9UC70

    Protein attributes for TPT1 Gene

    172 amino acids
    Molecular mass:
    19595 Da
    Quaternary structure:
    • Interacts with STEAP3.

    Three dimensional structures from OCA and Proteopedia for TPT1 Gene

    Alternative splice isoforms for TPT1 Gene


neXtProt entry for TPT1 Gene

Post-translational modifications for TPT1 Gene

  • Ubiquitination at Lys 102 and Lys 164
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for TPT1 (TPT1)

No data available for DME Specific Peptides for TPT1 Gene

Domains & Families for TPT1 Gene

Suggested Antigen Peptide Sequences for TPT1 Gene

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 TCTP domain.
  • Belongs to the TCTP family.
  • Contains 1 TCTP domain.
  • Belongs to the TCTP family.
genes like me logo Genes that share domains with TPT1: view

No data available for Gene Families for TPT1 Gene

Function for TPT1 Gene

Molecular function for TPT1 Gene

GENATLAS Biochemistry:
tumor protein,translationally controlled 1
UniProtKB/Swiss-Prot Function:
Involved in calcium binding and microtubule stabilization.
UniProtKB/Swiss-Prot Induction:
Down-regulated in response to enterovirus 71 (EV71) infection.

Gene Ontology (GO) - Molecular Function for TPT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005509 calcium ion binding IDA 15162379
GO:0005515 protein binding IPI 16730713
GO:0008017 microtubule binding IBA --
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with TPT1: view
genes like me logo Genes that share phenotypes with TPT1: view

Animal Models for TPT1 Gene

MGI Knock Outs for TPT1:

Animal Model Products

  • Taconic Biosciences Mouse Models for TPT1

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for TPT1

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for TPT1 Gene

Localization for TPT1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TPT1 Gene


Subcellular locations from

Jensen Localization Image for TPT1 Gene COMPARTMENTS Subcellular localization image for TPT1 gene
Compartment Confidence
endosome 5
extracellular 5
nucleus 5
cytosol 4
cytoskeleton 2
plasma membrane 2
endoplasmic reticulum 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for TPT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 15319436
GO:0005634 nucleus IDA 11598139
GO:0005737 cytoplasm TAS 16130169
GO:0005771 multivesicular body IDA 15319436
GO:0045298 colocalizes_with tubulin complex IDA 15162379
genes like me logo Genes that share ontologies with TPT1: view

Pathways & Interactions for TPT1 Gene

genes like me logo Genes that share pathways with TPT1: view

Pathways by source for TPT1 Gene

4 Cell Signaling Technology pathways for TPT1 Gene
1 BioSystems pathway for TPT1 Gene

SIGNOR curated interactions for TPT1 Gene

Is inactivated by:

Gene Ontology (GO) - Biological Process for TPT1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006816 calcium ion transport IC 15958728
GO:0006874 cellular calcium ion homeostasis IC 15958728
GO:0009615 response to virus IEP 16548883
GO:0030154 cell differentiation IBA --
GO:0042981 regulation of apoptotic process NAS 15162379
genes like me logo Genes that share ontologies with TPT1: view

Drugs & Compounds for TPT1 Gene

(8) Drugs for TPT1 Gene - From: HMDB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
calcium Nutra 0

(5) Additional Compounds for TPT1 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with TPT1: view

Transcripts for TPT1 Gene

Unigene Clusters for TPT1 Gene

Tumor protein, translationally-controlled 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for TPT1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPT1 Gene

ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b · 3c · 3d · 3e ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7a · 7b · 7c
SP1: - - - - - -
SP2: - - - -
SP3: - -
SP4: - - -
SP5: - -
SP7: -
SP8: - - - -
SP9: - -

Relevant External Links for TPT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TPT1 Gene

mRNA expression in normal human tissues for TPT1 Gene

mRNA differential expression in normal tissues according to GTEx for TPT1 Gene

This gene is overexpressed in Muscle - Skeletal (x5.1).

Protein differential expression in normal tissues from HIPED for TPT1 Gene

This gene is overexpressed in Oral epithelium (8.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for TPT1 Gene

Protein tissue co-expression partners for TPT1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TPT1 Gene:


SOURCE GeneReport for Unigene cluster for TPT1 Gene:


mRNA Expression by UniProt/SwissProt for TPT1 Gene:

Tissue specificity: Found in several healthy and tumoral cells including erythrocytes, hepatocytes, macrophages, platelets, keratinocytes, erythroleukemia cells, gliomas, melanomas, hepatoblastomas, and lymphomas. It cannot be detected in kidney and renal cell carcinoma (RCC). Expressed in placenta and prostate.
genes like me logo Genes that share expression patterns with TPT1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery for TPT1 Gene

Orthologs for TPT1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for TPT1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia TPT1 34
  • 96.51 (n)
  • 99.42 (a)
-- 35
  • 97 (a)
TPT1 35
  • 99 (a)
TPT1 35
  • 99 (a)
(Canis familiaris)
Mammalia TPT1 34
  • 95.74 (n)
  • 100 (a)
TPT1 35
  • 100 (a)
(Mus musculus)
Mammalia Tpt1 34
  • 90.31 (n)
  • 95.93 (a)
Tpt1 16
Tpt1 35
  • 96 (a)
(Pan troglodytes)
Mammalia TPT1 34
  • 99.81 (n)
  • 100 (a)
TPT1 35
  • 100 (a)
(Rattus norvegicus)
Mammalia Tpt1 34
  • 90.7 (n)
  • 95.93 (a)
(Monodelphis domestica)
Mammalia TPT1 35
  • 80 (a)
(Ornithorhynchus anatinus)
Mammalia TPT1 35
  • 98 (a)
(Gallus gallus)
Aves TPT1 34
  • 84.88 (n)
  • 90.12 (a)
TPT1 35
  • 90 (a)
(Anolis carolinensis)
Reptilia TPT1 35
  • 85 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.17076 34
tpt1 34
  • 70.54 (n)
  • 68.6 (a)
African clawed frog
(Xenopus laevis)
Amphibia tpt1-prov 34
(Danio rerio)
Actinopterygii tctp 34
tpt1 34
  • 68.23 (n)
  • 67.25 (a)
tpt1 35
  • 54 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG4800 36
  • 48 (a)
Tctp 34
  • 57.68 (n)
  • 52.1 (a)
Tctp 35
  • 48 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta TCTP_ANOGA 34
  • 56.69 (n)
  • 49.7 (a)
(Caenorhabditis elegans)
Secernentea tct-1 34
  • 51.28 (n)
  • 40.24 (a)
tct-1 35
  • 33 (a)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ABR075C 34
  • 53.49 (n)
  • 43.11 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0C12716g 34
  • 55.49 (n)
  • 44.91 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes TMA19 34
  • 56.29 (n)
  • 43.11 (a)
TMA19 35
  • 43 (a)
TMA19 37
thale cress
(Arabidopsis thaliana)
eudicotyledons TCTP 34
  • 51.61 (n)
  • 39.76 (a)
(Oryza sativa)
Liliopsida Os11g0660500 34
  • 51.81 (n)
  • 37.95 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU06464 34
  • 54.69 (n)
  • 46.71 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPAC1F12.02c 34
  • 55.69 (n)
  • 50.9 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.5297 35
  • 39 (a)
Species where no ortholog for TPT1 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TPT1 Gene

Gene Tree for TPT1 (if available)
Gene Tree for TPT1 (if available)

Paralogs for TPT1 Gene

(1) SIMAP similar genes for TPT1 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with TPT1: view

No data available for Paralogs for TPT1 Gene

Variants for TPT1 Gene

Sequence variations from dbSNP and Humsavar for TPT1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
VAR_052273 -
rs729054 -- 45,335,277(+) GACTT(A/T)AATAG utr-variant-3-prime
rs1062421 -- 45,336,965(-) AACAT(A/C/T)TGAAG utr-variant-3-prime
rs2325216 -- 45,335,846(+) TTAGT(A/G)TCTGC utr-variant-3-prime
rs3196907 -- 45,333,478(-) AGAAC(A/C)CTGAT utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for TPT1 Gene

Variant ID Type Subtype PubMed ID
nsv1046200 CNV gain 25217958
nsv477869 CNV novel sequence insertion 20440878
nsv510579 CNV deletion 20534489
nsv951078 CNV duplication 24416366
nsv977234 CNV duplication 23825009
nsv983582 CNV duplication 23825009

Variation tolerance for TPT1 Gene

Residual Variation Intolerance Score: 29.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.13; 2.94% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for TPT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for TPT1 Gene

Disorders for TPT1 Gene

MalaCards: The human disease database

(12) MalaCards diseases for TPT1 Gene - From: DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
allergic rhinitis
  • atopic rhinitis
paraneoplastic cerebellar degeneration
eumycotic mycetoma
  • eumycetoma
  • asthma, protection against
- elite association - COSMIC cancer census association via MalaCards
Search TPT1 in MalaCards View complete list of genes associated with diseases

Relevant External Links for TPT1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with TPT1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for TPT1 Gene

Publications for TPT1 Gene

  1. The translationally controlled tumor protein is a novel calcium binding protein of the human placenta and regulates calcium handling in trophoblast cells. (PMID: 15958728) Arcuri F. … Cintorino M. (Biol. Reprod. 2005) 3 4 22 65
  2. Translationally controlled tumor protein (TCTP) in the human prostate and prostate cancer cells: expression, distribution, and calcium binding activity. (PMID: 15162379) Arcuri F. … del Vecchio M.T. (Prostate 2004) 3 4 22 65
  3. Plk phosphorylation regulates the microtubule-stabilizing protein TCTP. (PMID: 12167714) Yarm F.R. (Mol. Cell. Biol. 2002) 3 4 22 65
  4. Chromosomal localization of tumor protein, translationally-controlled 1 (TPT1) encoding the human histamine releasing factor (HRF) to 13q12-->q14. (PMID: 10343127) MacDonald S.M. … Jabs E.W. (Cytogenet. Cell Genet. 1999) 2 3 22 65
  5. Translationally controlled tumor protein: a protein identified in several nontumoral cells including erythrocytes. (PMID: 9059837) Sanchez J.-C. … Hochstrasser D.F. (Electrophoresis 1997) 3 4 22 65

Products for TPT1 Gene

  • Cloud-Clone Corp. Antibodies for TPT1
  • Cloud-Clone Corp. Proteins for TPT1
  • Cloud-Clone Corp Assay Kits for TPT1

Sources for TPT1 Gene

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