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TPSP2 Gene(Pseudogene)

Tryptase Pseudogene 2

GCID:
GC16M001286
GIFtS:
14
Genes Participants
UDN Logo

Aliases for TPSP2 Gene

Aliases for TPSP2 Gene

  • Tryptase Pseudogene 2 2 3 5
  • Tryptase Beta Pseudogene 3
  • Mastin 3

External Ids for TPSP2 Gene

Previous GeneCards Identifiers for TPSP2 Gene

  • GC16U990163
  • GC16M001277
  • GC00U931360
  • GC16M001345
  • GC16M001347
  • GC16M001348
  • GC16M001349

Summaries for TPSP2 Gene

GeneCards Summary for TPSP2 Gene

TPSP2 (Tryptase Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPSP2 Gene

Genomics for TPSP2 Gene

Products:

  1. Regulatory Element

Regulatory Elements for TPSP2 Gene

Enhancers for TPSP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G001291 1.1 FANTOM5 ENCODE 0.7 -2.1 -2119 0.4 FOXA2 NFIB SAP130 ARID4B YY1 HIC1 E2F1 EGR1 SCRT2 NR2F6 BAIAP3 TPSD1 RPS20P2 GNPTG TSR3 UBE2I CACNA1H TPSP2 ENSG00000260710
GH16G001294 1 FANTOM5 0.4 -5.4 -5386 0.3 ATF1 ZNF766 ELK1 FOS CAVIN1 ZHX2 ZNF592 MEF2D CREB3 SMARCA4 RPS20P2 TPSD1 BAIAP3 GNPTG TSR3 TMEM204 JMJD8 ENSG00000260710 TPSP2
GH16G001295 0.4 ENCODE 0.4 -6.7 -6663 0.5 AGO1 RPS20P2 TPSD1 BAIAP3 GNPTG TSR3 ENSG00000260710 TPSP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPSP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPSP2 Gene

Chromosome:
16
Start:
1,286,343 bp from pter
End:
1,289,073 bp from pter
Size:
2,731 bases
Orientation:
Minus strand

Genomic View for TPSP2 Gene

Genes around TPSP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPSP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPSP2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TPSP2 Gene

Proteins for TPSP2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TPSP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPSP2 Gene

Domains & Families for TPSP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPSP2 Gene

Function for TPSP2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPSP2 Gene

Localization for TPSP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPSP2 Gene

Pathways & Interactions for TPSP2 Gene

SuperPathways for TPSP2 Gene

PathCards logo More details on SuperPathways for TPSP2
No Data Available

Interacting Proteins for TPSP2 Gene

Gene Ontology (GO) - Biological Process for TPSP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPSP2 Gene

Drugs & Compounds for TPSP2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TPSP2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for TPSP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPSP2 Gene

No ASD Table

Relevant External Links for TPSP2 Gene

GeneLoc Exon Structure for
TPSP2
ECgene alternative splicing isoforms for
TPSP2

Expression for TPSP2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPSP2 Gene

mRNA expression in normal human tissues for TPSP2 Gene
mRNA expression by GTEx for TPSP2 Gene

mRNA differential expression in normal tissues according to GTEx for TPSP2 Gene

This gene is overexpressed in Pituitary (x23.8), Liver (x10.7), and Bladder (x6.0).

NURSA nuclear receptor signaling pathways regulating expression of TPSP2 Gene:

TPSP2
genes like me logo Genes that share expression patterns with TPSP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPSP2 Gene

Orthologs for TPSP2 Gene

Evolution for TPSP2 Gene

ENSEMBL:
Gene Tree for TPSP2 (if available)
TreeFam:
Gene Tree for TPSP2 (if available)

No data available for Orthologs for TPSP2 Gene

Paralogs for TPSP2 Gene

No data available for Paralogs for TPSP2 Gene

Variants for TPSP2 Gene

Relevant External Links for TPSP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPSP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPSP2 Gene

Disorders for TPSP2 Gene

No disorders were found for TPSP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPSP2 Gene

Publications for TPSP2 Gene

  1. Characterization of human gamma-tryptases, novel members of the chromosome 16p mast cell tryptase and prostasin gene families. (PMID: 10843716) Caughey G.H. … Verghese G.M. (J. Immunol. 2000) 2 3 64
  2. New developments in the genetics and activation of mast cell proteases. (PMID: 12217407) Caughey G.H. (Mol. Immunol. 2002) 3 64

Products for TPSP2 Gene

Sources for TPSP2 Gene

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