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Aliases for TPRX1P1 Gene

Aliases for TPRX1P1 Gene

  • Tetrapeptide Repeat Homeobox 1 Pseudogene 1 2 3 5
  • Tetra-Peptide Repeat Homeobox 1 Pseudogene 1 3
  • Tetra-Peptide Repeat Homeobox Pseudogene 2 3
  • TPRXP2 3

External Ids for TPRX1P1 Gene

Previous GeneCards Identifiers for TPRX1P1 Gene

  • GC10U900625
  • GC10M080928
  • GC10M081258

Summaries for TPRX1P1 Gene

Entrez Gene Summary for TPRX1P1 Gene

  • Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the TPRX homeobox gene family. [provided by RefSeq, Jul 2008]

GeneCards Summary for TPRX1P1 Gene

TPRX1P1 (Tetrapeptide Repeat Homeobox 1 Pseudogene 1) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPRX1P1 Gene

Genomics for TPRX1P1 Gene

Regulatory Elements for TPRX1P1 Gene

Enhancers for TPRX1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F079489 1.1 Ensembl ENCODE 0.4 +9.2 9189 1.8 CTCF RNF2 MLX MAX DPF2 MNT E2F4 RAD21 ZIC2 ZFHX2 ENSG00000272489 BEND3P3 NUTM2B-AS1 ENSG00000235705 TPRX1P1 LOC105378383
GH10F079487 1 Ensembl ENCODE 0.4 +11.7 11687 2.2 ATF1 PKNOX1 ZFP64 RAD21 ZNF143 RCOR1 FOS ZMIZ1 CREM ZNF654 BEND3P3 MBL1P LOC642361 ENSG00000235705 TPRX1P1 LOC105378383
GH10F079482 0.9 Ensembl ENCODE 0.3 +16.3 16304 2.4 ZNF263 PKNOX1 GFI1B KLF17 SIN3A ZIC2 NR2F2 ZFHX2 JUND ZNF341 BEND3P3 ENSG00000235426 ENSG00000235705 NUTM2B TPRX1P1 LOC105378383
GH10F079473 0.6 Ensembl 0.3 +26.8 26812 0.4 SOX13 CEBPG RAD21 RARA YY1 CBX5 NR2F6 GATAD2A SOX5 RFX1 BEND3P3 ENSG00000235426 ZCCHC24 LOC642361 LOC105378383 TPRX1P1
GH10F079463 0.2 ENCODE 0.3 +35.7 35716 1.0 EBF1 ZNF18 BEND3P3 ENSG00000235426 ENSG00000235705 LOC105378383 TPRX1P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TPRX1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPRX1P1 Gene

Chromosome:
10
Start:
79,499,088 bp from pter
End:
79,500,012 bp from pter
Size:
925 bases
Orientation:
Minus strand

Genomic View for TPRX1P1 Gene

Genes around TPRX1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPRX1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPRX1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPRX1P1 Gene

Proteins for TPRX1P1 Gene

Post-translational modifications for TPRX1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPRX1P1 Gene

Domains & Families for TPRX1P1 Gene

Gene Families for TPRX1P1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TPRX1P1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPRX1P1 Gene

Function for TPRX1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPRX1P1 Gene

Localization for TPRX1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPRX1P1 Gene

Pathways & Interactions for TPRX1P1 Gene

SuperPathways for TPRX1P1 Gene

No Data Available

Interacting Proteins for TPRX1P1 Gene

Gene Ontology (GO) - Biological Process for TPRX1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPRX1P1 Gene

Transcripts for TPRX1P1 Gene

mRNA/cDNA for TPRX1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TPRX1P1 Gene

No ASD Table

Relevant External Links for TPRX1P1 Gene

GeneLoc Exon Structure for
TPRX1P1
ECgene alternative splicing isoforms for
TPRX1P1

Expression for TPRX1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPRX1P1 Gene

mRNA differential expression in normal tissues according to GTEx for TPRX1P1 Gene

This gene is overexpressed in Testis (x18.6), Brain - Frontal Cortex (BA9) (x6.2), Brain - Cortex (x6.1), Brain - Cerebellum (x5.8), and Brain - Putamen (basal ganglia) (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of TPRX1P1 Gene:

TPRX1P1
genes like me logo Genes that share expression patterns with TPRX1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TPRX1P1 Gene

Orthologs for TPRX1P1 Gene

Evolution for TPRX1P1 Gene

ENSEMBL:
Gene Tree for TPRX1P1 (if available)
TreeFam:
Gene Tree for TPRX1P1 (if available)

No data available for Orthologs for TPRX1P1 Gene

Paralogs for TPRX1P1 Gene

No data available for Paralogs for TPRX1P1 Gene

Variants for TPRX1P1 Gene

Relevant External Links for TPRX1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPRX1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPRX1P1 Gene

Disorders for TPRX1P1 Gene

No disorders were found for TPRX1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPRX1P1 Gene

Publications for TPRX1P1 Gene

No publications were found for TPRX1P1 Gene.

Products for TPRX1P1 Gene

Sources for TPRX1P1 Gene

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