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Aliases for TPRG1-AS2 Gene

Subcategory (RNA class) for TPRG1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TPRG1-AS2 Gene

  • TPRG1 Antisense RNA 2 2 3 5
  • TPRG1 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for TPRG1-AS2 Gene

Previous GeneCards Identifiers for TPRG1-AS2 Gene

  • GC00U933006
  • GC03M188957

Summaries for TPRG1-AS2 Gene

GeneCards Summary for TPRG1-AS2 Gene

TPRG1-AS2 (TPRG1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TPRG1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPRG1-AS2 Gene

Genomics for TPRG1-AS2 Gene

Regulatory Elements for TPRG1-AS2 Gene

Enhancers for TPRG1-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H189275 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -36.5 -36471 2.3 JUN MAX BATF POLR2A SMARCC2 FOS RUNX3 JUNB CEBPB ATF2 TPRG1-AS2 TP63 LOC105374270
GH03H189267 1.4 Ensembl ENCODE dbSUPER 10.9 -28.6 -28575 3.4 PKNOX1 NFIB BMI1 BRCA1 RAD21 RFX5 RCOR1 FOS RUNX3 DEK TPRG1-AS2 LOC105374270
GH03H189292 1 ENCODE dbSUPER 10.1 -52.9 -52887 1.5 ELK4 TBP SMARCC1 RFX1 MAX CEBPB ELF1 EP300 RFX5 E2F1 TPRG1-AS2 LOC105374270
GH03H189288 0.8 FANTOM5 10.5 -48.2 -48190 0.2 PKNOX1 TBL1XR1 BMI1 BATF RELA RFX5 EED ETV6 RUNX3 IKZF2 TPRG1-AS2 LOC105374270
GH03H189714 0.8 Ensembl ENCODE 9.9 -474.6 -474560 1.1 EED ATF7 RUNX3 EP300 MIR944 TPRG1-AS2 TP63 ENSG00000227971 GC03P189814
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPRG1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TPRG1-AS2 Gene

Genomic Locations for TPRG1-AS2 Gene
1,909 bases
Minus strand

Genomic View for TPRG1-AS2 Gene

Genes around TPRG1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPRG1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPRG1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPRG1-AS2 Gene

Proteins for TPRG1-AS2 Gene

Post-translational modifications for TPRG1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPRG1-AS2 Gene

Domains & Families for TPRG1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPRG1-AS2 Gene

Function for TPRG1-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPRG1-AS2 Gene

Localization for TPRG1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPRG1-AS2 Gene

Pathways & Interactions for TPRG1-AS2 Gene

SuperPathways for TPRG1-AS2 Gene

No Data Available

Interacting Proteins for TPRG1-AS2 Gene

Gene Ontology (GO) - Biological Process for TPRG1-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for TPRG1-AS2 Gene

Drugs & Compounds for TPRG1-AS2 Gene

No Compound Related Data Available

Transcripts for TPRG1-AS2 Gene

mRNA/cDNA for TPRG1-AS2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TPRG1-AS2 Gene

TPRG1 antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPRG1-AS2 Gene

No ASD Table

Relevant External Links for TPRG1-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TPRG1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPRG1-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for TPRG1-AS2 Gene

This gene is overexpressed in Esophagus - Mucosa (x15.5), Vagina (x9.1), Cervix - Ectocervix (x6.2), Skin - Not Sun Exposed (Suprapubic) (x5.3), and Skin - Sun Exposed (Lower leg) (x5.0).

SOURCE GeneReport for Unigene cluster for TPRG1-AS2 Gene:

genes like me logo Genes that share expression patterns with TPRG1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPRG1-AS2 Gene

Orthologs for TPRG1-AS2 Gene

Evolution for TPRG1-AS2 Gene

Gene Tree for TPRG1-AS2 (if available)
Gene Tree for TPRG1-AS2 (if available)

No data available for Orthologs for TPRG1-AS2 Gene

Paralogs for TPRG1-AS2 Gene

No data available for Paralogs for TPRG1-AS2 Gene

Variants for TPRG1-AS2 Gene

Sequence variations from dbSNP and Humsavar for TPRG1-AS2 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1001816334 -- 189,241,120(+) TTCTA(C/G)AAGTG intron-variant, upstream-variant-2KB
rs1002079177 -- 189,241,831(+) GAAGT(A/G)CCTTT intron-variant, upstream-variant-2KB
rs1004089684 -- 189,239,549(+) CTAAT(C/T)TGTGT intron-variant
rs1004153518 -- 189,240,099(+) AGCAC(A/G)AGTTC intron-variant
rs1005090814 -- 189,242,155(+) ATCCA(G/T)ATGGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for TPRG1-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv829819 CNV gain 17160897

Relevant External Links for TPRG1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TPRG1-AS2 Gene

Disorders for TPRG1-AS2 Gene

Relevant External Links for TPRG1-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for TPRG1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPRG1-AS2 Gene

Publications for TPRG1-AS2 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 60

Products for TPRG1-AS2 Gene

Sources for TPRG1-AS2 Gene

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