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Aliases for TPRG1-AS1 Gene

Subcategory (RNA class) for TPRG1-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TPRG1-AS1 Gene

  • TPRG1 Antisense RNA 1 2 3
  • TPRG1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TPRG1-AS1 Gene

ORGUL Members for TPRG1-AS1 Gene

Previous GeneCards Identifiers for TPRG1-AS1 Gene

  • GC00U933570
  • GC03M188660

Summaries for TPRG1-AS1 Gene

GeneCards Summary for TPRG1-AS1 Gene

TPRG1-AS1 (TPRG1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPRG1-AS1 Gene

Genomics for TPRG1-AS1 Gene

Genomic Location for TPRG1-AS1 Gene

Start:
188,941,715 bp from pter
End:
188,947,639 bp from pter
Size:
5,925 bases
Orientation:
Minus strand

Genomic View for TPRG1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TPRG1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPRG1-AS1 Gene

No data available for Regulatory Elements for TPRG1-AS1 Gene

Proteins for TPRG1-AS1 Gene

Post-translational modifications for TPRG1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPRG1-AS1 Gene

Domains for TPRG1-AS1 Gene

Gene Families for TPRG1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TPRG1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPRG1-AS1 Gene

Function for TPRG1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TPRG1-AS1 Gene

Localization for TPRG1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPRG1-AS1 Gene

Pathways for TPRG1-AS1 Gene

SuperPathways for TPRG1-AS1 Gene

No Data Available

Interacting Proteins for TPRG1-AS1 Gene

Gene Ontology (GO) - Biological Process for TPRG1-AS1 Gene

None

No data available for Pathways by source for TPRG1-AS1 Gene

Transcripts for TPRG1-AS1 Gene

mRNA/cDNA for TPRG1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TPRG1-AS1 Gene

No ASD Table

Relevant External Links for TPRG1-AS1 Gene

GeneLoc Exon Structure for
TPRG1-AS1
ECgene alternative splicing isoforms for
TPRG1-AS1

Expression for TPRG1-AS1 Gene

mRNA expression in normal human tissues for TPRG1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for TPRG1-AS1 Gene

This gene is overexpressed in Liver (15.1), Adipose - Visceral (Omentum) (4.5), and Adrenal Gland (4.0).
genes like me logo Genes that share expressions with TPRG1-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TPRG1-AS1 Gene

Orthologs for TPRG1-AS1 Gene

Evolution for TPRG1-AS1 Gene

ENSEMBL:
Gene Tree for TPRG1-AS1 (if available)
TreeFam:
Gene Tree for TPRG1-AS1 (if available)

No data available for Orthologs for TPRG1-AS1 Gene

Paralogs for TPRG1-AS1 Gene

No data available for Paralogs for TPRG1-AS1 Gene

Variants for TPRG1-AS1 Gene

Sequence variations from dbSNP and Humsavar for TPRG1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs3058849 -- 188,941,505(+) TTTTT(-/T/TT)GAGAT downstream-variant-500B
rs3914203 -- 188,944,321(+) AGGGA(G/T)CCAGG intron-variant
rs3914204 -- 188,943,369(+) ACGTA(A/G)CCCCG intron-variant
rs6444340 -- 188,946,630(+) GTAGG(G/T)TTATC intron-variant
rs6778275 -- 188,944,889(+) GGCCA(A/G)CGTAA intron-variant

Relevant External Links for TPRG1-AS1 Gene

HapMap Linkage Disequilibrium report
TPRG1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TPRG1-AS1 Gene

Disorders for TPRG1-AS1 Gene

No disorders were found for TPRG1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for TPRG1-AS1 Gene

Publications for TPRG1-AS1 Gene

No publications were found for TPRG1-AS1 Gene.

Products for TPRG1-AS1 Gene

Sources for TPRG1-AS1 Gene

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