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Aliases for TPMTP2 Gene

Aliases for TPMTP2 Gene

  • Thiopurine S-Methyltransferase Pseudogene 2 2 3 5

External Ids for TPMTP2 Gene

Summaries for TPMTP2 Gene

GeneCards Summary for TPMTP2 Gene

TPMTP2 (Thiopurine S-Methyltransferase Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPMTP2 Gene

Genomics for TPMTP2 Gene

Regulatory Elements for TPMTP2 Gene

Enhancers for TPMTP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F042148 1.2 Ensembl ENCODE 0.8 -3.3 -3274 3.4 CBX3 PKNOX1 ATF1 ARID4B SIN3A FEZF1 BMI1 ZNF2 RAD21 ZNF143 SEC22C ENSG00000212145 TPMTP2 GC03P042217
GH03F042177 1.6 FANTOM5 Ensembl ENCODE 0.3 -33.5 -33516 4.7 HDGF HDAC1 CBX3 PKNOX1 SIN3A ARID4B RFX5 SCRT2 FOS DEK VIPR1 VIPR1-AS1 TRAK1 TPMTP2 GC03P042217
GH03F042159 0.9 ENCODE 0.4 -14.2 -14189 3.1 PKNOX1 ARID4B ZNF48 ZNF121 GLIS2 EGR2 SMARCC1 SP3 SP5 ZBTB11 TPMTP2 GC03P042217
GH03F042163 1 Ensembl ENCODE 0.3 -18.5 -18451 3.4 GATAD2A PKNOX1 CEBPB REST JUND CTBP1 GATA3 SMARCA4 POLR2A EED TPMTP2 GC03P042217
GH03F042183 1 Ensembl ENCODE 0.3 -38.1 -38095 2.6 BCOR ZNF146 USF1 JUN NFYC ZMYM3 CEBPB USF2 ZNF384 MNT VIPR1 VIPR1-AS1 TRAK1 GC03P042217 TPMTP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPMTP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPMTP2 Gene

Chromosome:
3
Start:
42,145,508 bp from pter
End:
42,146,427 bp from pter
Size:
920 bases
Orientation:
Minus strand

Genomic View for TPMTP2 Gene

Genes around TPMTP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPMTP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPMTP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPMTP2 Gene

Proteins for TPMTP2 Gene

Post-translational modifications for TPMTP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPMTP2 Gene

Domains & Families for TPMTP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPMTP2 Gene

Function for TPMTP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPMTP2 Gene

Localization for TPMTP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPMTP2 Gene

Pathways & Interactions for TPMTP2 Gene

SuperPathways for TPMTP2 Gene

No Data Available

Interacting Proteins for TPMTP2 Gene

Gene Ontology (GO) - Biological Process for TPMTP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPMTP2 Gene

Transcripts for TPMTP2 Gene

mRNA/cDNA for TPMTP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TPMTP2 Gene

No ASD Table

Relevant External Links for TPMTP2 Gene

GeneLoc Exon Structure for
TPMTP2
ECgene alternative splicing isoforms for
TPMTP2

Expression for TPMTP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPMTP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of TPMTP2 Gene:

TPMTP2
genes like me logo Genes that share expression patterns with TPMTP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TPMTP2 Gene

Orthologs for TPMTP2 Gene

Evolution for TPMTP2 Gene

ENSEMBL:
Gene Tree for TPMTP2 (if available)
TreeFam:
Gene Tree for TPMTP2 (if available)

No data available for Orthologs for TPMTP2 Gene

Paralogs for TPMTP2 Gene

No data available for Paralogs for TPMTP2 Gene

Variants for TPMTP2 Gene

Relevant External Links for TPMTP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPMTP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPMTP2 Gene

Disorders for TPMTP2 Gene

No disorders were found for TPMTP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPMTP2 Gene

Publications for TPMTP2 Gene

  1. Thiopurine S-methyltransferase pharmacogenetics: variant allele functional and comparative genomics. (PMID: 16220112) Salavaggione O.E. … Weinshilboum R.M. (Pharmacogenet. Genomics 2005) 3 64

Products for TPMTP2 Gene

Sources for TPMTP2 Gene

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