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Aliases for TPMTP1 Gene

Aliases for TPMTP1 Gene

  • Thiopurine S-Methyltransferase Pseudogene 1 2 3 5

External Ids for TPMTP1 Gene

Previous GeneCards Identifiers for TPMTP1 Gene

  • GC18P043411
  • GC18P045157

Summaries for TPMTP1 Gene

GeneCards Summary for TPMTP1 Gene

TPMTP1 (Thiopurine S-Methyltransferase Pseudogene 1) is a Pseudogene.

Additional gene information for TPMTP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPMTP1 Gene

Genomics for TPMTP1 Gene

Regulatory Elements for TPMTP1 Gene

Enhancers for TPMTP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H047594 1.4 ENCODE 0.3 -35.0 -34968 0 MXI1 POLR2A TPMTP1 GC18M047500
GH18H047560 1.9 VISTA ENCODE 0.2 -68.9 -68864 1 CTBP2 GC18M047500 TPMTP1
GH18H047577 0.4 ENCODE 0.2 -52.3 -52291 0 USF2 GC18M047500 TPMTP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPMTP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPMTP1 Gene

Chromosome:
18
Start:
47,630,015 bp from pter
End:
47,631,792 bp from pter
Size:
1,778 bases
Orientation:
Plus strand

Genomic View for TPMTP1 Gene

Genes around TPMTP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPMTP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPMTP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPMTP1 Gene

Proteins for TPMTP1 Gene

Post-translational modifications for TPMTP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPMTP1 Gene

Domains & Families for TPMTP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPMTP1 Gene

Function for TPMTP1 Gene

Phenotypes From GWAS Catalog for TPMTP1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TPMTP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPMTP1 Gene

Localization for TPMTP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPMTP1 Gene

Pathways & Interactions for TPMTP1 Gene

SuperPathways for TPMTP1 Gene

No Data Available

Interacting Proteins for TPMTP1 Gene

Gene Ontology (GO) - Biological Process for TPMTP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPMTP1 Gene

Drugs & Compounds for TPMTP1 Gene

No Compound Related Data Available

Transcripts for TPMTP1 Gene

mRNA/cDNA for TPMTP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TPMTP1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TPMTP1 Gene

No ASD Table

Relevant External Links for TPMTP1 Gene

GeneLoc Exon Structure for
TPMTP1
ECgene alternative splicing isoforms for
TPMTP1

Expression for TPMTP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPMTP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of TPMTP1 Gene:

TPMTP1
genes like me logo Genes that share expression patterns with TPMTP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPMTP1 Gene

Orthologs for TPMTP1 Gene

Evolution for TPMTP1 Gene

ENSEMBL:
Gene Tree for TPMTP1 (if available)
TreeFam:
Gene Tree for TPMTP1 (if available)

No data available for Orthologs for TPMTP1 Gene

Paralogs for TPMTP1 Gene

No data available for Paralogs for TPMTP1 Gene

Variants for TPMTP1 Gene

Relevant External Links for TPMTP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPMTP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPMTP1 Gene

Disorders for TPMTP1 Gene

Relevant External Links for TPMTP1

Genetic Association Database (GAD)
TPMTP1

No disorders were found for TPMTP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TPMTP1 Gene

Publications for TPMTP1 Gene

  1. Thiopurine methyltransferase pharmacogenetics. Cloning of human liver cDNA and a processed pseudogene on human chromosome 18q21.1. (PMID: 7628307) Lee D … Weinshilboum RM (Drug metabolism and disposition: the biological fate of chemicals 1995) 2 3 60
  2. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 45 60

Products for TPMTP1 Gene

Sources for TPMTP1 Gene

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