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Aliases for TPM3P6 Gene

Aliases for TPM3P6 Gene

  • Tropomyosin 3 Pseudogene 6 2 3 5

External Ids for TPM3P6 Gene

Previous GeneCards Identifiers for TPM3P6 Gene

  • GC19P053983

Summaries for TPM3P6 Gene

GeneCards Summary for TPM3P6 Gene

TPM3P6 (Tropomyosin 3 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPM3P6 Gene

Genomics for TPM3P6 Gene

Regulatory Elements for TPM3P6 Gene

Enhancers for TPM3P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F053093 0.8 Ensembl ENCODE 18.3 -380.1 -380090 10.7 HDGF ATF1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ETS1 YY1 GLIS2 ZNF766 ZNF415 ZNF701 ZNF160 ZNF808 TPM3P6 ZNF765 ZNF845 ZNF525 ENSG00000269825
GH19F053389 0.2 ENCODE 16.4 -89.4 -89354 1.8 KLF1 SUZ12 CREB3L1 ZNF76 DEAF1 DIDO1 ZNF766 ZNF366 POLR2A ZNF143 ZNF808 ZNF765 ZNF525 ZNF813 ENSG00000268970 ZNF845 ZNF137P ZNF816 ENSG00000269825 TPM3P6
GH19F053364 0.5 ENCODE 16.3 -113.6 -113592 1.6 HDGF CREB3L1 ZFP64 ARID4B SIN3A DMAP1 KLF13 ZNF263 SP3 REST ZNF525 ZNF808 ZNF845 ENSG00000268970 ZNF137P ZNF765 ZNF816 ENSG00000269825 ZNF813 TPM3P6
GH19F053864 1 FANTOM5 ENCODE 16.3 +389.6 389633 9.8 PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 ZNF845 ZNF765 ZNF816 ENSG00000235681 ZNF813 TPM3P6 LENG8-AS1 MYADM ZNF525 ZNF665
GH19F053893 0.2 ENCODE 16.3 +413.9 413900 0.2 SUZ12 CREB3L1 HCFC1 ZBTB11 ZNF76 DEAF1 SIX5 ZEB2 ETS1 MBD2 ZNF765 CDC42EP5 ZNF813 ZNF845 ZNF816 ENSG00000235681 TPM3P6 LENG8-AS1 ZNF525 ZNF665
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TPM3P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPM3P6 Gene

Chromosome:
19
Start:
53,479,282 bp from pter
End:
53,480,365 bp from pter
Size:
1,084 bases
Orientation:
Plus strand

Genomic View for TPM3P6 Gene

Genes around TPM3P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPM3P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPM3P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPM3P6 Gene

Proteins for TPM3P6 Gene

Post-translational modifications for TPM3P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPM3P6 Gene

Domains & Families for TPM3P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPM3P6 Gene

Function for TPM3P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPM3P6 Gene

Localization for TPM3P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPM3P6 Gene

Pathways & Interactions for TPM3P6 Gene

SuperPathways for TPM3P6 Gene

No Data Available

Interacting Proteins for TPM3P6 Gene

Gene Ontology (GO) - Biological Process for TPM3P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPM3P6 Gene

Transcripts for TPM3P6 Gene

mRNA/cDNA for TPM3P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TPM3P6 Gene

No ASD Table

Relevant External Links for TPM3P6 Gene

GeneLoc Exon Structure for
TPM3P6
ECgene alternative splicing isoforms for
TPM3P6

Expression for TPM3P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TPM3P6 Gene

mRNA differential expression in normal tissues according to GTEx for TPM3P6 Gene

This gene is overexpressed in Prostate (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of TPM3P6 Gene:

TPM3P6
genes like me logo Genes that share expression patterns with TPM3P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TPM3P6 Gene

Orthologs for TPM3P6 Gene

Evolution for TPM3P6 Gene

ENSEMBL:
Gene Tree for TPM3P6 (if available)
TreeFam:
Gene Tree for TPM3P6 (if available)

No data available for Orthologs for TPM3P6 Gene

Paralogs for TPM3P6 Gene

No data available for Paralogs for TPM3P6 Gene

Variants for TPM3P6 Gene

Relevant External Links for TPM3P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPM3P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPM3P6 Gene

Disorders for TPM3P6 Gene

No disorders were found for TPM3P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPM3P6 Gene

Publications for TPM3P6 Gene

  1. The mRNA and RNA-copy pseudogenes encoding TM30nm, a human cytoskeletal tropomyosin. (PMID: 3024106) McLeod A.R. … Talbot K. (Nucleic Acids Res. 1986) 3 64

Products for TPM3P6 Gene

Sources for TPM3P6 Gene

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