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Aliases for TPM3P6 Gene

Aliases for TPM3P6 Gene

  • Tropomyosin 3 Pseudogene 6 2 3 5

External Ids for TPM3P6 Gene

Previous GeneCards Identifiers for TPM3P6 Gene

  • GC19P053983

Summaries for TPM3P6 Gene

GeneCards Summary for TPM3P6 Gene

TPM3P6 (Tropomyosin 3 Pseudogene 6) is a Pseudogene.

Additional gene information for TPM3P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPM3P6 Gene

Genomics for TPM3P6 Gene

GeneHancer (GH) Regulatory Elements for TPM3P6 Gene

Promoters and enhancers for TPM3P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I053479 Promoter 0.5 EPDnew 550.8 +0.0 31 0.1 GC19P053480 TPM3P6 ZNF813
GH19I054199 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 32.7 +726.4 726428 12.1 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 RPS9 PRPF31 LENG8 LENG8-AS1 CNOT3 ZNF525 ZNF845 ENSG00000235681 LILRB5 ZNF765
GH19I052733 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 20.9 -744.0 -744039 2.9 HDGF SMAD1 ARID4B SIN3A ZNF48 POLR2B E2F8 ARID2 ATF7 SP3 ZNF611 ZNF701 ZNF137P ENSG00000268970 ENSG00000269001 ZNF845 ZNF808 ZNF160 ZNF525 ZNF816
GH19I053466 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 23.3 -11.4 -11391 1.8 PKNOX1 ATF1 ARID4B DMAP1 SLC30A9 POLR2B E2F8 ATF7 SP3 SP5 ZNF813 CNOT3 ZNF701 ZNF600 LENG8 ZNF845 ZNF808 ENSG00000269001 ENSG00000268970 ZNF160
GH19I053517 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 21.2 +40.3 40332 4.8 PKNOX1 SMAD1 ARNT ARID4B SIN3A YY1 ZNF766 E2F8 ZNF143 KLF13 ZNF331 ZNF137P LENG8 ZNF525 LENG8-AS1 PRPF31 CNOT3 ZNF160 ZNF701 ZNF83
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TPM3P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TPM3P6 Gene

Genomic Locations for TPM3P6 Gene
chr19:53,479,282-53,480,365
(GRCh38/hg38)
Size:
1,084 bases
Orientation:
Plus strand
chr19:53,982,536-53,983,619
(GRCh37/hg19)

Genomic View for TPM3P6 Gene

Genes around TPM3P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPM3P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPM3P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPM3P6 Gene

Proteins for TPM3P6 Gene

Post-translational modifications for TPM3P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPM3P6 Gene

Domains & Families for TPM3P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPM3P6 Gene

Function for TPM3P6 Gene

Phenotypes From GWAS Catalog for TPM3P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPM3P6 Gene

Localization for TPM3P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPM3P6 Gene

Pathways & Interactions for TPM3P6 Gene

SuperPathways for TPM3P6 Gene

No Data Available

Interacting Proteins for TPM3P6 Gene

Gene Ontology (GO) - Biological Process for TPM3P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPM3P6 Gene

Drugs & Compounds for TPM3P6 Gene

No Compound Related Data Available

Transcripts for TPM3P6 Gene

mRNA/cDNA for TPM3P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TPM3P6 Gene

No ASD Table

Relevant External Links for TPM3P6 Gene

GeneLoc Exon Structure for
TPM3P6
ECgene alternative splicing isoforms for
TPM3P6

Expression for TPM3P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPM3P6 Gene

mRNA differential expression in normal tissues according to GTEx for TPM3P6 Gene

This gene is overexpressed in Prostate (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of TPM3P6 Gene:

TPM3P6
genes like me logo Genes that share expression patterns with TPM3P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPM3P6 Gene

Orthologs for TPM3P6 Gene

Evolution for TPM3P6 Gene

ENSEMBL:
Gene Tree for TPM3P6 (if available)
TreeFam:
Gene Tree for TPM3P6 (if available)

No data available for Orthologs for TPM3P6 Gene

Paralogs for TPM3P6 Gene

No data available for Paralogs for TPM3P6 Gene

Variants for TPM3P6 Gene

Additional Variant Information for TPM3P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPM3P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPM3P6 Gene

Disorders for TPM3P6 Gene

No disorders were found for TPM3P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPM3P6 Gene

Publications for TPM3P6 Gene

  1. The mRNA and RNA-copy pseudogenes encoding TM30nm, a human cytoskeletal tropomyosin. (PMID: 3024106) MacLeod AR … Talbot K (Nucleic acids research 1986) 3 58

Products for TPM3P6 Gene

Sources for TPM3P6 Gene

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