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Aliases for TPM3P6 Gene

Aliases for TPM3P6 Gene

  • Tropomyosin 3 Pseudogene 6 2 3 5

External Ids for TPM3P6 Gene

Previous GeneCards Identifiers for TPM3P6 Gene

  • GC19P053983

Summaries for TPM3P6 Gene

GeneCards Summary for TPM3P6 Gene

TPM3P6 (Tropomyosin 3 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPM3P6 Gene

Genomics for TPM3P6 Gene

Regulatory Elements for TPM3P6 Gene

Enhancers for TPM3P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G053864 1.8 FANTOM5 ENCODE dbSUPER 16.3 +389.6 389633 9.8 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ZNF845 ZNF765 ZNF816 ENSG00000269001 ENSG00000235681 ZNF813 TPM3P6 LENG8-AS1 MYADM ZNF525
GH19G054199 1.9 FANTOM5 ENCODE dbSUPER 10.5 +726.4 726429 12.1 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 LILRB5 RPS9 PRPF31 LILRB3 LILRA6 LILRA2 LILRA4 VSTM1 LILRA5 ENSG00000249189
GH19G053364 1.1 ENCODE 16.3 -113.6 -113592 1.6 HDGF HNRNPUL1 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZBTB7B ZNF207 KLF13 ZNF525 ZNF808 ZNF845 ENSG00000268970 ZNF137P ZNF765 ZNF816 ENSG00000269825 ENSG00000269001 ZNF813
GH19G053430 1 ENCODE 17.6 -47.2 -47234 2.4 PKNOX1 ATF1 FOXA2 CREB3L1 ARID4B SIN3A DMAP1 ZNF48 YY1 SLC30A9 ZNF761 TPM3P9 TPM3P6 ZNF137P ENSG00000268970 ZNF701 ZNF611 PRPF31 ZNF525 ZNF665
GH19G052733 1.4 FANTOM5 ENCODE 12.4 -744.0 -744013 2.8 HDGF ARID4B SIN3A ZNF48 ELK1 SP3 SP5 REST ZNF518A ZNF592 ZNF611 ZNF137P ENSG00000268970 ZNF701 TPM3P9 ZNF525 ZNF665 TPM3P6 ZNF28 ZNF845
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPM3P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPM3P6 Gene

Chromosome:
19
Start:
53,479,282 bp from pter
End:
53,480,365 bp from pter
Size:
1,084 bases
Orientation:
Plus strand

Genomic View for TPM3P6 Gene

Genes around TPM3P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPM3P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPM3P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPM3P6 Gene

Proteins for TPM3P6 Gene

Post-translational modifications for TPM3P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPM3P6 Gene

Domains & Families for TPM3P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPM3P6 Gene

Function for TPM3P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPM3P6 Gene

Localization for TPM3P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TPM3P6 Gene

Pathways & Interactions for TPM3P6 Gene

SuperPathways for TPM3P6 Gene

No Data Available

Interacting Proteins for TPM3P6 Gene

Gene Ontology (GO) - Biological Process for TPM3P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPM3P6 Gene

Drugs & Compounds for TPM3P6 Gene

No Compound Related Data Available

Transcripts for TPM3P6 Gene

mRNA/cDNA for TPM3P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TPM3P6 Gene

No ASD Table

Relevant External Links for TPM3P6 Gene

GeneLoc Exon Structure for
TPM3P6
ECgene alternative splicing isoforms for
TPM3P6

Expression for TPM3P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPM3P6 Gene

mRNA differential expression in normal tissues according to GTEx for TPM3P6 Gene

This gene is overexpressed in Prostate (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of TPM3P6 Gene:

TPM3P6
genes like me logo Genes that share expression patterns with TPM3P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPM3P6 Gene

Orthologs for TPM3P6 Gene

Evolution for TPM3P6 Gene

ENSEMBL:
Gene Tree for TPM3P6 (if available)
TreeFam:
Gene Tree for TPM3P6 (if available)

No data available for Orthologs for TPM3P6 Gene

Paralogs for TPM3P6 Gene

No data available for Paralogs for TPM3P6 Gene

Variants for TPM3P6 Gene

Relevant External Links for TPM3P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPM3P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPM3P6 Gene

Disorders for TPM3P6 Gene

No disorders were found for TPM3P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPM3P6 Gene

Publications for TPM3P6 Gene

  1. The mRNA and RNA-copy pseudogenes encoding TM30nm, a human cytoskeletal tropomyosin. (PMID: 3024106) McLeod A.R. … Talbot K. (Nucleic Acids Res. 1986) 3 64

Products for TPM3P6 Gene

Sources for TPM3P6 Gene

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