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Aliases for TPM3P4 Gene

Aliases for TPM3P4 Gene

  • Tropomyosin 3 Pseudogene 4 2 3 5

External Ids for TPM3P4 Gene

Previous GeneCards Identifiers for TPM3P4 Gene

  • GC07P027114

Summaries for TPM3P4 Gene

GeneCards Summary for TPM3P4 Gene

TPM3P4 (Tropomyosin 3 Pseudogene 4) is a Pseudogene.

Additional gene information for TPM3P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TPM3P4 Gene

Genomics for TPM3P4 Gene

Regulatory Elements for TPM3P4 Gene

Enhancers for TPM3P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H027095 3.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 14.7 +114.5 114533 86 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A SSRP1 ZNF610 HNRNPA2B1 HOTAIRM1 HOXA10-AS HOXA2 HOXA-AS2 CBX3 HOXA9 HOXA11-AS HOXA10 TPM3P4
GH07H026372 2.1 ENCODE 14.6 -648.7 -648671 5 HDGF ARID4B FEZF1 ZNF2 ZNF302 ZNF143 ZNF548 SP3 REST ZNF662 HNRNPA2B1 RPL23P7 TPM3P4 HMGB3P20 ENSG00000227386 HOXA10-AS HOXA9 CBX3 KIAA0087 C7orf71
GH07H026862 1.4 ENCODE dbSUPER 14.7 -159.5 -159549 3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 HOTAIRM1 HNRNPA2B1 HMGB3P20 TPM3P4 RPL23P7 PSMC1P2 HOXA-AS3 HOXA4 HOXA3 HOXA6
GH07H027030 1 Ensembl ENCODE 0.4 +7.9 7855 2 PKNOX1 RB1 L3MBTL2 CEBPB CEBPG FEZF1 ELF1 ZNF384 REST EP300 HOTAIRM1 SKAP2 HOXA1 HOXA2 HOXA-AS2 HOXA3 TPM3P4 NHP2P2
GH07H027046 0.7 Ensembl ENCODE 0.3 +23.6 23615 1 MAFF JUND JUN HOTAIRM1 HOXA1 HOXA2 HOXA-AS2 HOXA3 SKAP2 NHP2P2 TPM3P4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TPM3P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for TPM3P4 Gene

Chromosome:
7
Start:
27,023,663 bp from pter
End:
27,026,490 bp from pter
Size:
2,828 bases
Orientation:
Plus strand

Genomic View for TPM3P4 Gene

Genes around TPM3P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TPM3P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TPM3P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TPM3P4 Gene

Proteins for TPM3P4 Gene

Post-translational modifications for TPM3P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TPM3P4 Gene

Domains & Families for TPM3P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TPM3P4 Gene

Function for TPM3P4 Gene

Phenotypes From GWAS Catalog for TPM3P4 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TPM3P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TPM3P4 Gene

Localization for TPM3P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TPM3P4 Gene

Pathways & Interactions for TPM3P4 Gene

SuperPathways for TPM3P4 Gene

No Data Available

Interacting Proteins for TPM3P4 Gene

Gene Ontology (GO) - Biological Process for TPM3P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TPM3P4 Gene

Drugs & Compounds for TPM3P4 Gene

No Compound Related Data Available

Transcripts for TPM3P4 Gene

mRNA/cDNA for TPM3P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TPM3P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TPM3P4 Gene

No ASD Table

Relevant External Links for TPM3P4 Gene

GeneLoc Exon Structure for
TPM3P4
ECgene alternative splicing isoforms for
TPM3P4

Expression for TPM3P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TPM3P4 Gene

Protein differential expression in normal tissues from HIPED for TPM3P4 Gene

This gene is overexpressed in Lung (22.2), Brain (20.9), Skin (13.7), and Heart (8.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for TPM3P4 Gene



Protein tissue co-expression partners for TPM3P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of TPM3P4 Gene:

TPM3P4
genes like me logo Genes that share expression patterns with TPM3P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TPM3P4 Gene

Orthologs for TPM3P4 Gene

Evolution for TPM3P4 Gene

ENSEMBL:
Gene Tree for TPM3P4 (if available)
TreeFam:
Gene Tree for TPM3P4 (if available)

No data available for Orthologs for TPM3P4 Gene

Paralogs for TPM3P4 Gene

No data available for Paralogs for TPM3P4 Gene

Variants for TPM3P4 Gene

Relevant External Links for TPM3P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TPM3P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TPM3P4 Gene

Disorders for TPM3P4 Gene

No disorders were found for TPM3P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TPM3P4 Gene

Publications for TPM3P4 Gene

  1. The P-body component USP52/PAN2 is a novel regulator of HIF1A mRNA stability. (PMID: 23398456) Bett JS … Hay RT (The Biochemical journal 2013) 3 60
  2. VCP phosphorylation-dependent interaction partners prevent apoptosis in Helicobacter pylori-infected gastric epithelial cells. (PMID: 23383273) Yu CC … Chow LP (PloS one 2013) 3 60
  3. A census of human soluble protein complexes. (PMID: 22939629) Havugimana PC … Emili A (Cell 2012) 3 60
  4. The mRNA and RNA-copy pseudogenes encoding TM30nm, a human cytoskeletal tropomyosin. (PMID: 3024106) MacLeod AR … Talbot K (Nucleic acids research 1986) 3 60

Products for TPM3P4 Gene

Sources for TPM3P4 Gene

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